RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 HVCN1Q96D96 273 aa19.92■□□□□ 0.78
PHGDH-204ENST00000469443 MSTO1Q9BUK6 570 aa19.92■□□□□ 0.78
PHGDH-204ENST00000469443 ZDHHC7Q9NXF8 308 aa19.92■□□□□ 0.78
PHGDH-204ENST00000469443 MTRRQ9UBK8 725 aa19.92■□□□□ 0.78
PHGDH-204ENST00000469443 FBXW11Q9UKB1 542 aa19.92■□□□□ 0.78
PHGDH-204ENST00000469443 I3L4J1 428 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 CUTAO60888 179 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 TKTP29401 623 aaKnown RBP19.91■□□□□ 0.78
PHGDH-204ENST00000469443 PPP2R3AQ06190 1150 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 ZDHHC14Q8IZN3 488 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 PLCD3Q8N3E9 789 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 RPF1Q9H9Y2 349 aaKnown RBP19.91■□□□□ 0.78
PHGDH-204ENST00000469443 NUB1Q9Y5A7 615 aa19.91■□□□□ 0.78
PHGDH-204ENST00000469443 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-204ENST00000469443 ANKRD63C9JTQ0 380 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ADAM12O43184 909 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ZMYND10O75800 440 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 PPP1R37O75864 691 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 IDEP14735 1019 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 RAB33AQ14088 237 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ENOX2Q16206 610 aaKnown RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 FOXD4L6Q3SYB3 417 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ZBTB41Q5SVQ8 909 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 FOXD4L3Q6VB84 417 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ANKS3Q6ZW76 656 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 SMG7Q92540 1137 aaKnown RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ZNF707Q96C28 371 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 ACSF2Q96CM8 615 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 KIF12Q96FN5 646 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 STRA6Q9BX79 667 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 MRPL44Q9H9J2 332 aaKnown RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 TUBGCP4Q9UGJ1 667 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 RAPGEFL1Q9UHV5 662 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 UBQLN1Q9UMX0 589 aaKnown RBP19.9■□□□□ 0.78
PHGDH-204ENST00000469443 BACE2Q9Y5Z0 518 aa19.9■□□□□ 0.78
PHGDH-204ENST00000469443 FRMD3A2A2Y4 597 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 LACTBL1A8MY62 500 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 XPOTO43592 962 aaKnown RBP19.89■□□□□ 0.77
PHGDH-204ENST00000469443 ADRB2P07550 413 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 OR1D2P34982 312 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 SCN1AP35498 2009 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 SPAG1Q07617 926 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 PKP1Q13835 747 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 ZBTB6Q15916 424 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 ZNF318Q5VUA4 2279 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 ATL3Q6DD88 541 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 SLFN12LQ6IEE8 588 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 OTOP3Q7RTS5 596 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 KCNG4Q8TDN1 519 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 TSPAN18Q96SJ8 248 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 PRKD2Q9BZL6 878 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 TNMDQ9H2S6 317 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 WDR6Q9NNW5 1121 aaKnown RBP19.89■□□□□ 0.77
PHGDH-204ENST00000469443 OLFML3Q9NRN5 406 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 CPSF3Q9UKF6 684 aaKnown RBP19.89■□□□□ 0.77
PHGDH-204ENST00000469443 STYXL1Q9Y6J8 313 aa19.89■□□□□ 0.77
PHGDH-204ENST00000469443 CLUHO75153 1309 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 SYN3O14994 580 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 CYP3A5P20815 502 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 LRPAP1P30533 357 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 MCM4P33991 863 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 E2F4Q16254 413 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 VARS2Q5ST30 1063 aaKnown RBP19.88■□□□□ 0.77
PHGDH-204ENST00000469443 LIN9Q5TKA1 542 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 ADALQ6DHV7 355 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 SHC4Q6S5L8 630 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 RSPO2Q6UXX9 243 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-204ENST00000469443 TRIM67Q6ZTA4 783 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 CD302Q8IX05 232 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 SUSD3Q96L08 255 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 CUEDC2Q9H467 287 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 PIDD1Q9HB75 910 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 PANK4Q9NVE7 773 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 TBC1D7Q9P0N9 293 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 EXOC7Q9UPT5 735 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 CDY1Q9Y6F8 540 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 NOTCH4Q99466 2003 aa19.88■□□□□ 0.77
PHGDH-204ENST00000469443 TISP43B9A030 160 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 GCNT3O95395 438 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 SIGLEC14Q08ET2 396 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 AXDND1Q5T1B0 1012 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-204ENST00000469443 L1TD1Q5T7N2 865 aaKnown RBP19.87■□□□□ 0.77
PHGDH-204ENST00000469443 CCDC65Q8IXS2 484 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 STAMQ92783 540 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 FAM212AQ96EL1 285 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 ACCSQ96QU6 501 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 KBTBD4Q9NVX7 518 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 LIMD1Q9UGP4 676 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 AGO2Q9UKV8 859 aaKnown RBP19.87■□□□□ 0.77
PHGDH-204ENST00000469443 CFAP45Q9UL16 551 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 SORCS3Q9UPU3 1222 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 HCN4Q9Y3Q4 1203 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 PCDHB13Q9Y5F0 798 aa19.87■□□□□ 0.77
PHGDH-204ENST00000469443 TMEM221A6NGB7 291 aa19.86■□□□□ 0.77
PHGDH-204ENST00000469443 M0R296 226 aa19.86■□□□□ 0.77
PHGDH-204ENST00000469443 C8AP07357 584 aa19.86■□□□□ 0.77
PHGDH-204ENST00000469443 HNRNPA1P09651 372 aaKnown RBP eCLIP19.86■□□□□ 0.77
PHGDH-204ENST00000469443 HOXA9P31269 272 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms