RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 WASHC5Q12768 1159 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 FSTL1Q12841 308 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 LRRC43Q8N309 656 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 LARP4BQ92615 738 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 TEPSINQ96N21 525 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 TIPINQ9BVW5 301 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 NUP85Q9BW27 656 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RNPEPL1Q9HAU8 725 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 GBA2Q9HCG7 927 aaPredicted RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 ZNF304Q9HCX3 659 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RIC8AQ9NPQ8 531 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 GPRC5CQ9NQ84 441 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 DISC1Q9NRI5 854 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 LRCH1Q9Y2L9 728 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 GOLGA8IPA6NC78 632 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 GOLGA8JA6NMD2 632 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 TBC1D12O60347 775 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 FBXO21O94952 628 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 S100BP04271 92 aaPredicted RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 POLR2FP61218 127 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 ZBTB17Q13105 803 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RSPH3Q86UC2 560 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 FBXO16Q8IX29 292 aaPredicted RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 ENGASEQ8NFI3 743 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 SGIP1Q9BQI5 828 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 EHMT1Q9H9B1 1298 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 FAM207AQ9NSI2 230 aaPredicted RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 FAM32AQ9Y421 112 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 VWA5AO00534 786 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 TJP3O95049 919 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 CYP1A2P05177 515 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 MZF1P28698 734 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 ERCC5P28715 1186 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 UBXN1Q04323 297 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 SEPT6Q14141 434 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 TMEM132BQ14DG7 1078 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 TAF1CQ15572 869 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 WDR45BQ5MNZ6 344 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 METTL21CQ5VZV1 264 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 COPS5Q92905 334 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 NFU1Q9UMS0 254 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 NOX1Q9Y5S8 564 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 ESYT3A0FGR9 886 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 SRRM3A6NNA2 597 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 TBKBP1A7MCY6 615 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 MEIS2O14770 477 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 PPP6R2O75170 966 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 COL6A2P12110 1019 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 VAV1P15498 845 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 ZNF132P52740 706 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 ARFIP2P53365 341 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 ATP2C1P98194 919 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 PPIDQ08752 370 aaKnown RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 NPY5RQ15761 445 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 CRY1Q16526 586 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 NEPROQ6NW34 567 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 OSTM1Q86WC4 334 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 GRAMD2AQ8IUY3 354 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 RAVER1Q8IY67 606 aaKnown RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 FNBP1Q96RU3 617 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 HNRNPABQ99729 332 aaKnown RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 NLRC4Q9NPP4 1024 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 KCNH7Q9NS40 1196 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 HOXC10Q9NYD6 342 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 DSEQ9UL01 958 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 FAF1Q9UNN5 650 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 TELO2Q9Y4R8 837 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 PSMA7O14818 248 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 MSH4O15457 936 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 SRGAP2CP0DJJ0 459 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 AMPD3Q01432 767 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 RBL2Q08999 1139 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 PCSK7Q16549 785 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 COBLL1Q53SF7 1204 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 CYP4F22Q6NT55 531 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 LSM14AQ8ND56 463 aaKnown RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 PRPF31Q8WWY3 499 aaKnown RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 SKA1Q96BD8 255 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 TUBGCP5Q96RT8 1024 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 PSMB7Q99436 277 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 TEX13BQ9BXU2 312 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 ASCC2Q9H1I8 757 aaPredicted RBP10.53□□□□□ -0.72
NUP50-214ENST00000469163 PARVBQ9HBI1 364 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 CLIC5Q9NZA1 410 aa10.53□□□□□ -0.72
NUP50-214ENST00000469163 CASZ1Q86V15 1759 aa10.52□□□□□ -0.72
NUP50-214ENST00000469163 EML1O00423 815 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 BMP15O95972 392 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 NR3C2P08235 984 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 PLA2G4BP0C869 781 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 DRD4P21917 467 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 CETN2P41208 172 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 STK4Q13043 487 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 LY6KQ17RY6 165 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 LIN52Q52LA3 116 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms