RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 KLHDC7AQ5VTJ3 777 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 CNKSR3Q6P9H4 555 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
RPL39-202ENST00000468844 CCDC186Q7Z3E2 898 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 CACTINQ8WUQ7 758 aaKnown RBP18.88■□□□□ 0.61
RPL39-202ENST00000468844 PGBD4Q96DM1 585 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 PI4K2AQ9BTU6 479 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 NUP58Q9BVL2 599 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.88■□□□□ 0.61
RPL39-202ENST00000468844 APEX2Q9UBZ4 518 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 TUBGCP4Q9UGJ1 667 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 SIX4Q9UIU6 781 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 EOMESO95936 686 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 ITGB3P05106 788 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 UCHL3P15374 230 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 NCOA4Q13772 614 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 TRIM14Q14142 442 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 ARID5BQ14865 1188 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 PHLDB3Q6NSJ2 640 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 GJB7Q6PEY0 223 aa18.88■□□□□ 0.61
RPL39-202ENST00000468844 C18orf25Q96B23 403 aaPredicted RBP18.88■□□□□ 0.61
RPL39-202ENST00000468844 TRIM44Q96DX7 344 aaPredicted RBP18.88■□□□□ 0.61
RPL39-202ENST00000468844 PPP1R10Q96QC0 940 aaKnown RBP18.88■□□□□ 0.61
RPL39-202ENST00000468844 PHACTR2O75167 634 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 ADKP55263 362 aaKnown RBP18.87■□□□□ 0.61
RPL39-202ENST00000468844 LRMPQ12912 555 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 PPFIBP1Q86W92 1011 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 C7orf61Q8IZ16 206 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 TC2NQ8N9U0 490 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 TMEM161AQ9NX61 479 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 DPP3Q9NY33 737 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 FBXL5Q9UKA1 691 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 AJAP1Q9UKB5 411 aaPredicted RBP18.87■□□□□ 0.61
RPL39-202ENST00000468844 CAPN11Q9UMQ6 739 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 UBQLN1Q9UMX0 589 aaKnown RBP18.87■□□□□ 0.61
RPL39-202ENST00000468844 FHOD1Q9Y613 1164 aa18.87■□□□□ 0.61
RPL39-202ENST00000468844 MFAP3LO75121 409 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 SCNN1GP51170 649 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 POLR2FP61218 127 aaKnown RBP18.86■□□□□ 0.61
RPL39-202ENST00000468844 SOX4Q06945 474 aaPredicted RBP18.86■□□□□ 0.61
RPL39-202ENST00000468844 NAB2Q15742 525 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 CRIPAKQ8N1N5 446 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 RPS6KC1Q96S38 1066 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 GOLGA2P5Q9HBQ8 144 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 UBN1Q9NPG3 1134 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 NLRC4Q9NPP4 1024 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 CEP72Q9P209 647 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 PRKAG2Q9UGJ0 569 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 PDE4DIPQ5VU43 2346 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 A0A1W2PQJ5 194 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 CCDC85CA6NKD9 419 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 GOLGA6L6A8MZA4 724 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 ESPNB1AK53 854 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 ASS1P00966 412 aaKnown RBP18.86■□□□□ 0.61
RPL39-202ENST00000468844 KRT19P08727 400 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 MYL6P60660 151 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 IKBKEQ14164 716 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 CLLU1OSQ5K130 101 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 SPOPLQ6IQ16 392 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 ARHGEF19Q8IW93 802 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 IQCDQ96DY2 449 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 TSPAN18Q96SJ8 248 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 NAA15Q9BXJ9 866 aaKnown RBP18.86■□□□□ 0.61
RPL39-202ENST00000468844 ELAC1Q9H777 363 aaKnown RBP18.86■□□□□ 0.61
RPL39-202ENST00000468844 ITGA11Q9UKX5 1188 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 COL4A6Q14031 1691 aa18.86■□□□□ 0.61
RPL39-202ENST00000468844 OFD1O75665 1012 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 FGFR1P11362 822 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 POLR2BP30876 1174 aaKnown RBP18.85■□□□□ 0.61
RPL39-202ENST00000468844 TRPC3Q13507 836 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 IQCEQ6IPM2 695 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 BAP1Q92560 729 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 HTATIP2Q9BUP3 242 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 XYLT2Q9H1B5 865 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 LUC7L2Q9Y383 392 aaKnown RBP18.85■□□□□ 0.61
RPL39-202ENST00000468844 KIAA1671Q9BY89 1806 aa18.85■□□□□ 0.61
RPL39-202ENST00000468844 AKR1B15C9JRZ8 316 aaPredicted RBP18.84■□□□□ 0.61
RPL39-202ENST00000468844 INPPL1O15357 1258 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 ZC3H11AO75152 810 aaKnown RBP eCLIP18.84■□□□□ 0.61
RPL39-202ENST00000468844 PTMAP06454 111 aaKnown RBP18.84■□□□□ 0.61
RPL39-202ENST00000468844 THP07101 528 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 ACRP10323 421 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 KRT9P35527 623 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 GSDMDP57764 484 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 NOP14P78316 857 aaKnown RBP18.84■□□□□ 0.61
RPL39-202ENST00000468844 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
RPL39-202ENST00000468844 RRAGAQ7L523 313 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 CACNA2D4Q7Z3S7 1137 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 CNGA4Q8IV77 575 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 BEST2Q8NFU1 509 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 HELQQ8TDG4 1101 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 TATDN2Q93075 761 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 NT5C1BQ96P26 610 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 APOBEC3GQ9HC16 384 aaKnown RBP18.84■□□□□ 0.61
RPL39-202ENST00000468844 INPP5FQ9Y2H2 1132 aa18.84■□□□□ 0.61
RPL39-202ENST00000468844 TSC2P49815 1807 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms