RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 NMT1P30419 496 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 AFMP43652 599 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ALDH7A1P49419 539 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 LIG4P49917 911 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 FXR1P51114 621 aaKnown RBP eCLIP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CASP5P51878 434 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 YARSP54577 528 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ERVK-21P61565 698 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 PLCB3Q01970 1234 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 TAP1Q03518 808 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 LRRC63Q05C16 580 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 DSC1Q08554 894 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 GRIK3Q13003 919 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CUL4BQ13620 913 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 BTG3Q14201 252 aaPredicted RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 DHX8Q14562 1220 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 KNOP1Q1ED39 458 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 EDRF1Q3B7T1 1238 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF568Q3ZCX4 644 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 NOMO2Q5JPE7 1267 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CLLU1OSQ5K130 101 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF658Q5TYW1 1059 aaPredicted RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 PDE12Q6L8Q7 609 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ALKAL1Q6UXT8 129 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 AGMOQ6ZNB7 445 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 RBM43Q6ZSC3 357 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 USP37Q86T82 979 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 FIBCD1Q8N539 461 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 GSTCDQ8NEC7 633 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 URGCPQ8TCY9 931 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 SCFD1Q8WVM8 642 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 SMARCE1Q969G3 411 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF668Q96K58 619 aaPredicted RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 FBXL18Q96ME1 805 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 UROC1Q96N76 676 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CASD1Q96PB1 797 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 TGS1Q96RS0 853 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 PPP1R16BQ96T49 567 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 TMEM175Q9BSA9 504 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 C11orf84Q9BUA3 381 aaPredicted RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 MKNK1Q9BUB5 465 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CCDC94Q9BW85 323 aaPredicted RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 TARS2Q9BW92 718 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 EIF2AQ9BY44 585 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 LMAN2LQ9H0V9 348 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CDT1Q9H211 546 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 NXF3Q9H4D5 531 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 ZNF576Q9H609 170 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 AGPAT3Q9NRZ7 376 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 LMBRD1Q9NUN5 540 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 RNF19AQ9NV58 838 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 TYW1Q9NV66 732 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CNTN3Q9P232 1028 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 MAP10Q9P2G4 905 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 CPSF3Q9UKF6 684 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 LRFN2Q9ULH4 789 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 DERAQ9Y315 318 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 C2CD2Q9Y426 696 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 PCDHA5Q9Y5H7 936 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 MYO7AQ13402 2215 aa3.84□□□□□ -1.79
TRIM59-202ENST00000468542 PRRC2BQ5JSZ5 2229 aaKnown RBP3.84□□□□□ -1.79
TRIM59-202ENST00000468542 TTC26A0AVF1 554 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 BICDL2A1A5D9 508 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TBKBP1A7MCY6 615 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 H3BNC9 293 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PSMA7O14818 248 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 IKBKBO14920 756 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TGFB1I1O43294 461 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 XPOTO43592 962 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 EXTL3O43909 919 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 LILRB3O75022 631 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 RECQL4O94761 1208 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 UPP2O95045 317 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 IL18RAPO95256 599 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 NPTXRO95502 500 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 EDN1P05305 212 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 MYBP10242 640 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 FGFR1P11362 822 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 LIG1P18858 919 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 RPL13P26373 211 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ADSSP30520 456 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 CTHP32929 405 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 RPL9P32969 192 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 MCM4P33991 863 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 HOXD13P35453 343 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 BMPR1AP36894 532 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 MLH1P40692 756 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 AP3M2P53677 418 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 CLDN10P78369 228 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ELAVL2Q12926 359 aaKnown RBP3.83□□□□□ -1.8
TRIM59-202ENST00000468542 STK4Q13043 487 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TUSC3Q13454 348 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 STIM1Q13586 685 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 MORC3Q14149 939 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 SURF1Q15526 300 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 ZBTB6Q15916 424 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 PTPROQ16827 1216 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 TMEM132AQ24JP5 1023 aa3.83□□□□□ -1.8
TRIM59-202ENST00000468542 KLHL40Q2TBA0 621 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms