RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
SSR3-205ENST00000467789 ZMYND10O75800 440 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 FAM13AO94988 1023 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 PIGRP01833 764 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 PLCG1P19174 1290 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 SP100P23497 879 aaPredicted RBP11.32□□□□□ -0.6
SSR3-205ENST00000467789 DDIT3P35638 169 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 TXLNAP40222 546 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 CLCNKBP51801 687 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 UVSSAQ2YD98 709 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 KANK3Q6NY19 840 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 CEP57Q86XR8 500 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 PALB2Q86YC2 1186 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 FBXL6Q8N531 539 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 CEP120Q8N960 986 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 SMG7Q92540 1137 aaKnown RBP11.32□□□□□ -0.6
SSR3-205ENST00000467789 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 RAD54LQ92698 747 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 NXPE3Q969Y0 559 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 CLSTN3Q9BQT9 956 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 REEP2Q9BRK0 252 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 PIDD1Q9HB75 910 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 BLOC1S4Q9NUP1 217 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSR3-205ENST00000467789 IGSF9Q9P2J2 1179 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 MTRRQ9UBK8 725 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 FBXW11Q9UKB1 542 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 SRPRBQ9Y5M8 271 aaKnown RBP11.32□□□□□ -0.6
SSR3-205ENST00000467789 BACE2Q9Y5Z0 518 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 ZFP37Q9Y6Q3 630 aaPredicted RBP11.32□□□□□ -0.6
SSR3-205ENST00000467789 VWA8A3KMH1 1905 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 CLUHO75153 1309 aa11.32□□□□□ -0.6
SSR3-205ENST00000467789 SYN3O14994 580 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 XPOTO43592 962 aaKnown RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 TRAK2O60296 914 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 TBCAO75347 108 aaKnown RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 KRT18P05783 430 aaKnown RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 POU2F2P09086 479 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 CLTAP09496 248 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 OSTNP61366 133 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 RESTQ13127 1097 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 RAB33AQ14088 237 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 PTPAQ15257 358 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 PRSS55Q6UWB4 352 aaPredicted RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 MYCT1Q8N699 235 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 ZNF707Q96C28 371 aaPredicted RBP11.31□□□□□ -0.6
SSR3-205ENST00000467789 BICD1Q96G01 975 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 CXCL16Q9H2A7 254 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 ST6GALNAC4Q9H4F1 302 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 ANKFY1Q9P2R3 1169 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
SSR3-205ENST00000467789 ZDBF2Q9HCK1 2354 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 H7C4K7 107 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 K7ENM7 598 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 PODXLO00592 558 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 HNRNPDLO14979 420 aaKnown RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 STX6O43752 255 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 XYLBO75191 536 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 RFPL2O75678 378 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 CYP3A5P20815 502 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 PAX3P23760 479 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 OR1D2P34982 312 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.6
SSR3-205ENST00000467789 LIG4P49917 911 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 GTF2BQ00403 316 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 TDGQ13569 410 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 MCM6Q14566 821 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 CD302Q8IX05 232 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 SNX21Q969T3 373 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 HVCN1Q96D96 273 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 ZBTB45Q96K62 511 aaPredicted RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 GOLGA2P5Q9HBQ8 144 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 EPS15L1Q9UBC2 864 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 SEL1LQ9UBV2 794 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 FBXO2Q9UK22 296 aaPredicted RBP11.3□□□□□ -0.6
SSR3-205ENST00000467789 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 CLIC4Q9Y696 253 aa11.3□□□□□ -0.6
SSR3-205ENST00000467789 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
SSR3-205ENST00000467789 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
SSR3-205ENST00000467789 OGTO15294 1046 aa11.29□□□□□ -0.6
SSR3-205ENST00000467789 C8AP07357 584 aa11.29□□□□□ -0.6
SSR3-205ENST00000467789 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms