RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZBTB46Q86UZ6 589 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 LINC00476Q8WZB0 136 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 COA7Q96BR5 231 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 NAF1Q96HR8 494 aaKnown RBP5.57□□□□□ -1.52
SMC4-207ENST00000467263 NEU1Q99519 415 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 MYOCQ99972 504 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 MRI1Q9BV20 369 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 MANSC1Q9H8J5 431 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 TMEM140Q9NV12 185 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 MOCS1Q9NZB8 636 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 ARHGEF17Q96PE2 2063 aaPredicted RBP5.57□□□□□ -1.52
SMC4-207ENST00000467263 PNPLA7Q6ZV29 1317 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 MYBBP1AQ9BQG0 1328 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 CCDC154A6NI56 674 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 PJA2O43164 708 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 HTRA2O43464 458 aaPredicted RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 PPFIA4O75335 1185 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 GPR32O75388 356 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 SNUPNO95149 360 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 SNRPA1P09661 255 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 EDNRBP24530 442 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 WASP42768 502 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 SEC24CP53992 1094 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 USP14P54578 494 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 CLRN1P58418 232 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 TP53BP2Q13625 1128 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 IL10RAQ13651 578 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 C3orf36Q3SXR2 165 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 RRP12Q5JTH9 1297 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 ATXN7L2Q5T6C5 722 aaPredicted RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 METRNLQ641Q3 311 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 LCORLQ8N3X6 602 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 CPEB3Q8NE35 698 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 SUPT20HQ8NEM7 779 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 ASB10Q8WXI3 467 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 CYFIP2Q96F07 1278 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 DCLRE1CQ96SD1 692 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 CLCA2Q9UQC9 943 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 LUC7L2Q9Y383 392 aaKnown RBP5.56□□□□□ -1.52
SMC4-207ENST00000467263 IPPQ9Y573 584 aa5.56□□□□□ -1.52
SMC4-207ENST00000467263 SALL3Q9BXA9 1300 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 ZRANB2O95218 330 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMC4-207ENST00000467263 PDGFRBP09619 1106 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 ATP5JP18859 108 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 DDCP20711 480 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 RECQLP46063 649 aaPredicted RBP5.55□□□□□ -1.52
SMC4-207ENST00000467263 NEK2P51955 445 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 TAP1Q03518 808 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 MTM1Q13496 603 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 FBXO42Q6P3S6 717 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 DRICH1Q6PGQ1 229 aaPredicted RBP5.55□□□□□ -1.52
SMC4-207ENST00000467263 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 FAM98AQ8NCA5 519 aaKnown RBP5.55□□□□□ -1.52
SMC4-207ENST00000467263 KAT5Q92993 513 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 HDAC10Q969S8 669 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 CHMP4CQ96CF2 233 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 SLC23A1Q9UHI7 598 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 COX11Q9Y6N1 276 aa5.55□□□□□ -1.52
SMC4-207ENST00000467263 DRGXA6NNA5 263 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 ALDH1L1O75891 902 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 MGAT1P26572 445 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 CHN2P52757 468 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 TARDBPQ13148 414 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMC4-207ENST00000467263 PRR16Q569H4 304 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 ZNF529Q6P280 563 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 MED25Q71SY5 747 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 UBE3BQ7Z3V4 1068 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 MIER2Q8N344 545 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 CASKIN2Q8WXE0 1202 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 TMX3Q96JJ7 454 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 AASDHPPTQ9NRN7 309 aa5.54□□□□□ -1.52
SMC4-207ENST00000467263 USP15Q9Y4E8 981 aaPredicted RBP5.54□□□□□ -1.52
SMC4-207ENST00000467263 SPATA31A6Q5VVP1 1343 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 PIPSLA2A3N6 862 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 SPDEFO95238 335 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 BMPR1AP36894 532 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 ADKP55263 362 aaKnown RBP5.53□□□□□ -1.52
SMC4-207ENST00000467263 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 ATP8B2P98198 1209 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 CDC42EP1Q00587 391 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 FAM102AQ5T9C2 384 aaPredicted RBP5.53□□□□□ -1.52
SMC4-207ENST00000467263 OTUD7BQ6GQQ9 843 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 SIMC1Q8NDZ2 872 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 CAVIN3Q969G5 261 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 HOOK2Q96ED9 719 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 WDR26Q9H7D7 661 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 RSAD1Q9HA92 442 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 TYW1Q9NV66 732 aaKnown RBP5.53□□□□□ -1.52
SMC4-207ENST00000467263 FBXO34Q9NWN3 711 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 IP6K2Q9UHH9 426 aa5.53□□□□□ -1.52
SMC4-207ENST00000467263 TCRBV7S2A1N4TA0A589 114 aa5.52□□□□□ -1.53
SMC4-207ENST00000467263 GAGE12BA1L429 117 aa5.52□□□□□ -1.53
SMC4-207ENST00000467263 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
SMC4-207ENST00000467263 MARCH11A6NNE9 402 aa5.52□□□□□ -1.53
SMC4-207ENST00000467263 KIAA0391O15091 583 aaKnown RBP5.52□□□□□ -1.53
SMC4-207ENST00000467263 TEX33O43247 280 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms