RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CCDC180Q9P1Z9 1646 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 ZNF891A8MT65 544 aaPredicted RBP5.5□□□□□ -1.53
XRN1-206ENST00000467077 AKR1B10O60218 316 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 CD1AP06126 327 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 CKBP12277 381 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 IL2RBP14784 551 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 SDSP20132 328 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 SLC6A2P23975 617 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 ECHS1P30084 290 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 ADSLP30566 484 aaPredicted RBP5.5□□□□□ -1.53
XRN1-206ENST00000467077 PLCD1P51178 756 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 AWAT2Q6E213 333 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 ZNF782Q6ZMW2 699 aaPredicted RBP5.5□□□□□ -1.53
XRN1-206ENST00000467077 TOR1AIP2Q8NFQ8 470 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 HAPLN3Q96S86 360 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 KCTD10Q9H3F6 313 aa5.5□□□□□ -1.53
XRN1-206ENST00000467077 MAGEC2Q9UBF1 373 aaPredicted RBP5.5□□□□□ -1.53
XRN1-206ENST00000467077 LINC00473A8K010 186 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 KPNA6O60684 536 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 SRGNP10124 158 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 ALAS1P13196 640 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 CERS1P27544 350 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 GTF2F1P35269 517 aaKnown RBP eCLIP5.49□□□□□ -1.53
XRN1-206ENST00000467077 PER3P56645 1201 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 SART3Q15020 963 aaKnown RBP5.49□□□□□ -1.53
XRN1-206ENST00000467077 ZNF529Q6P280 563 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 FAM180AQ6UWF9 173 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 TMEM125Q96AQ2 219 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 ATRNL1Q5VV63 1379 aa5.49□□□□□ -1.53
XRN1-206ENST00000467077 CACNA1IQ9P0X4 2223 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 PROM1O43490 865 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 PRSS23O95084 383 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 NEK4P51957 841 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 LGALS4P56470 323 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 RASAL3Q86YV0 1011 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 MARS2Q96GW9 593 aaKnown RBP5.48□□□□□ -1.53
XRN1-206ENST00000467077 SENP6Q9GZR1 1112 aaPredicted RBP5.48□□□□□ -1.53
XRN1-206ENST00000467077 LANCL2Q9NS86 450 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 INTS13Q9NVM9 706 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 ADAM21Q9UKJ8 722 aa5.48□□□□□ -1.53
XRN1-206ENST00000467077 GSG1L2A8MUP6 293 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 PRR23D1E9PI22 279 aaPredicted RBP5.47□□□□□ -1.53
XRN1-206ENST00000467077 LPLP06858 475 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 CHRM2P08172 466 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 PRR23D2P0DMB1 279 aaPredicted RBP5.47□□□□□ -1.53
XRN1-206ENST00000467077 SCNN1BP51168 640 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 TERF2Q15554 542 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 ZNF260Q3ZCT1 412 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 NAALADL2Q58DX5 795 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 YTHDF3Q7Z739 585 aaKnown RBP5.47□□□□□ -1.53
XRN1-206ENST00000467077 NUP133Q8WUM0 1156 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 HMCESQ96FZ2 354 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 PGBD1Q96JS3 809 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 GPR101Q96P66 508 aaPredicted RBP5.47□□□□□ -1.53
XRN1-206ENST00000467077 VPS33BQ9H267 617 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 FBXO34Q9NWN3 711 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 ST3GAL5Q9UNP4 418 aa5.47□□□□□ -1.53
XRN1-206ENST00000467077 PPEF2O14830 753 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 TEX33O43247 280 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 ALDH1A3P47895 512 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 PTPRRQ15256 657 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 SLC44A4Q53GD3 710 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.46□□□□□ -1.54
XRN1-206ENST00000467077 C11orf74Q86VG3 221 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 SAMD14Q8IZD0 417 aaPredicted RBP5.46□□□□□ -1.54
XRN1-206ENST00000467077 FITM2Q8N6M3 262 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 SMRP1Q8NCR6 262 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 ADAMTS15Q8TE58 950 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 RIN2Q8WYP3 895 aaPredicted RBP5.46□□□□□ -1.54
XRN1-206ENST00000467077 MKL1Q969V6 931 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 PRDM12Q9H4Q4 367 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 ELOVL5Q9NYP7 299 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 HSFX1Q9UBD0 423 aa5.46□□□□□ -1.54
XRN1-206ENST00000467077 ADM5C9JUS6 153 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 ELFN1P0C7U0 828 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 MMP13P45452 471 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 TFF2Q03403 129 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 LAMB3Q13751 1172 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 TXNRD1Q16881 649 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 OTUD7BQ6GQQ9 843 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 PQLC1Q8N2U9 271 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 LRP12Q9Y561 859 aa5.45□□□□□ -1.54
XRN1-206ENST00000467077 URI1O94763 535 aaPredicted RBP5.44□□□□□ -1.54
XRN1-206ENST00000467077 TTLL1O95922 423 aa5.44□□□□□ -1.54
XRN1-206ENST00000467077 MIDNQ504T8 468 aa5.44□□□□□ -1.54
XRN1-206ENST00000467077 UBE3BQ7Z3V4 1068 aa5.44□□□□□ -1.54
XRN1-206ENST00000467077 GPR156Q8NFN8 814 aa5.44□□□□□ -1.54
XRN1-206ENST00000467077 TMEM140Q9NV12 185 aa5.44□□□□□ -1.54
XRN1-206ENST00000467077 PCDHB1Q9Y5F3 818 aa5.44□□□□□ -1.54
XRN1-206ENST00000467077 A0A1W2PS29 197 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 MPGP29372 298 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 NOMO3P69849 1222 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 NOMO1Q15155 1222 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 PREPLQ4J6C6 727 aaPredicted RBP5.43□□□□□ -1.54
XRN1-206ENST00000467077 NOMO2Q5JPE7 1267 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 SLC18B1Q6NT16 456 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 CLNKQ7Z7G1 428 aa5.43□□□□□ -1.54
XRN1-206ENST00000467077 ZDHHC17Q8IUH5 632 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms