RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 AHCYL2Q96HN2 611 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 PDLIM2Q96JY6 352 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 ADI1Q9BV57 179 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 INO80BQ9C086 356 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 GALNT9Q9HCQ5 603 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 RNF181Q9P0P0 153 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 SPATA31A6Q5VVP1 1343 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 FAM171A2A8MVW0 826 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 TEX33O43247 280 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 CD38P28907 300 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 SLC6A4P31645 630 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 WASP42768 502 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 NOMO3P69849 1222 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 NHLH1Q02575 133 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 FAPQ12884 760 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 NOMO1Q15155 1222 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 GEN1Q17RS7 908 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 NOMO2Q5JPE7 1267 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 DACT2Q5SW24 774 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 UBE3BQ7Z3V4 1068 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 FAM43AQ8N2R8 423 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 LNX2Q8N448 690 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 SSH3Q8TE77 659 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 REXO4Q9GZR2 422 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 ADARB2Q9NS39 739 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 TMEM140Q9NV12 185 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 FRMD4BQ9Y2L6 1034 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 PCDHGA2Q9Y5H1 932 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 NOX1Q9Y5S8 564 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 GPR45Q9Y5Y3 372 aa4.18□□□□□ -1.74
GTF3C3-209ENST00000466862 CDHR4A6H8M9 788 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 TRIM75PA6NK02 468 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 MATN4O95460 622 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 GPANK1O95872 356 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 FCER1AP12319 257 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 PER3P56645 1201 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 PROK1P58294 105 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 SPDYE7PQ495Y7 208 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 ZKSCAN2Q63HK3 967 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 FAM180AQ6UWF9 173 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 NUP133Q8WUM0 1156 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 CYFIP2Q96F07 1278 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 NAF1Q96HR8 494 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 SEMA4GQ9NTN9 838 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 KCTD5Q9NXV2 234 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 VSX1Q9NZR4 365 aaPredicted RBP4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 TUBD1Q9UJT1 453 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 TLK1Q9UKI8 766 aa4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 RUVBL1Q9Y265 456 aaKnown RBP4.17□□□□□ -1.74
GTF3C3-209ENST00000466862 MYADML2A6NDP7 307 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 ERN1O75460 977 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 RBMXL2O75526 392 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 CKBP12277 381 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 RARRES1P49788 294 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 KRTAP10-11P60412 298 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 TARDBPQ13148 414 aaKnown RBP eCLIP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 ERCC6LQ2NKX8 1250 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 INAVAQ3KP66 663 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 KIAA0895LQ68EN5 471 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 CBARPQ8N350 705 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 CCHCR1Q8TD31 782 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 DUSP26Q9BV47 211 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 SLKQ9H2G2 1235 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 TBCCD1Q9NVR7 557 aa4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 TESQ9UGI8 421 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 TMA7Q9Y2S6 64 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-209ENST00000466862 A0A1W2PS29 197 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 PROM1O43490 865 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 HAUS5O94927 633 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 C1RP00736 705 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 IGLV2-14P01704 120 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 ALAS1P13196 640 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 GSPT1P15170 499 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 DDCP20711 480 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 CACNA2D1P54289 1103 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 ELLP55199 621 aaPredicted RBP4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 CTXN1P60606 82 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 FOXF2Q12947 444 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 KLF1Q13351 362 aaPredicted RBP4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 RNF219Q5W0B1 726 aaPredicted RBP4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 WDR66Q8TBY9 1149 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 ACTRT2Q8TDY3 377 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 SSH1Q8WYL5 1049 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 MARS2Q96GW9 593 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 MED15Q96RN5 788 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 TLR10Q9BXR5 811 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 MANSC1Q9H8J5 431 aa4.15□□□□□ -1.75
GTF3C3-209ENST00000466862 PHLDB1Q86UU1 1377 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 TCRBV7S2A1N4TA0A589 114 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 WIPF3A6NGB9 483 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 MRPS35P82673 323 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 CT47A1Q5JQC4 288 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 SP5Q6BEB4 398 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 TMPRSS9Q7Z410 1059 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 FITM2Q8N6M3 262 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 CAGE1Q8TC20 777 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 NRG4Q8WWG1 115 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 ANKS1AQ92625 1134 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 NELL1Q92832 810 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms