RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 TIGD5Q53EQ6 642 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 MRM1Q6IN84 353 aaKnown RBP6.6□□□□□ -1.35
SSBP1-204ENST00000465167 EP400NLQ6ZTU2 488 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 SERINC5Q86VE9 423 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 JAZF1Q86VZ6 243 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 IL31RAQ8NI17 732 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 GLG1Q92896 1179 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 PPP1R9BQ96SB3 815 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 SDF4Q9BRK5 362 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-204ENST00000465167 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.6□□□□□ -1.35
SSBP1-204ENST00000465167 PSTPIP2Q9H939 334 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 RTEL1Q9NZ71 1219 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 SUCOQ9UBS9 1254 aaKnown RBP6.6□□□□□ -1.35
SSBP1-204ENST00000465167 CEP131Q9UPN4 1083 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 RWDD3Q9Y3V2 267 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 RBM8AQ9Y5S9 174 aaKnown RBP6.6□□□□□ -1.35
SSBP1-204ENST00000465167 DNAH12Q6ZR08 3092 aa6.6□□□□□ -1.35
SSBP1-204ENST00000465167 LAMA3Q16787 3333 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 FRMPD4Q14CM0 1322 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 NRCAMQ92823 1304 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 FAM95CA0A1B0GW59 222 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 LINC01553A4QN01 128 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 EPOPA6NHQ4 379 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 SMARCA1P28370 1054 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 KCNQ1P51787 676 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 TROAPQ12815 778 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 PPFIA1Q13136 1202 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 MTMR1Q13613 665 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 KRT40Q6A162 431 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 KIAA1211LQ6NV74 962 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 TAF2Q6P1X5 1199 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 HEATR3Q7Z4Q2 680 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 TMCO2Q7Z6W1 182 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-204ENST00000465167 CD163Q86VB7 1156 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 HSCBQ8IWL3 235 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 DBF4BQ8NFT6 615 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 PPP2R3CQ969Q6 453 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 VWCEQ96DN2 955 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 TBC1D32Q96NH3 1257 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 INPP4AQ96PE3 977 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-204ENST00000465167 DNAJC7Q99615 494 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 GPR20Q99678 358 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 SENP7Q9BQF6 1050 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 C16orf70Q9BSU1 422 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 MYL10Q9BUA6 226 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 IFIH1Q9BYX4 1025 aaKnown RBP6.59□□□□□ -1.35
SSBP1-204ENST00000465167 GTPBP4Q9BZE4 634 aaKnown RBP6.59□□□□□ -1.35
SSBP1-204ENST00000465167 SMARCAD1Q9H4L7 1026 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 AZI2Q9H6S1 392 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 C1GALT1Q9NS00 363 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 RBM28Q9NW13 759 aaKnown RBP6.59□□□□□ -1.35
SSBP1-204ENST00000465167 ERAP1Q9NZ08 941 aa6.59□□□□□ -1.35
SSBP1-204ENST00000465167 NAP1L2Q9ULW6 460 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-204ENST00000465167 LCHNA4D1U4 455 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 C1QTNF9BB2RNN3 333 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 RNF225M0QZC1 329 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 CYTH3O43739 400 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 CLEC3AO75596 197 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 SLITRK5O94991 958 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 LETM1O95202 739 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MARK3P27448 753 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 CTNNB1P35222 781 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 TCF7P36402 384 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 SP2Q02086 613 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 IFRD2Q12894 506 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 GPM6BQ13491 265 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 TRIM71Q2Q1W2 868 aaKnown RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 BBS9Q3SYG4 887 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 SDE2Q6IQ49 451 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 LETMD1Q6P1Q0 360 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 USP17L6PQ6QN14 398 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.58□□□□□ -1.362e-8■■■■■ 47
SSBP1-204ENST00000465167 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MICU3Q86XE3 530 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MB21D2Q8IYB1 491 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 FIBCD1Q8N539 461 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 IGDCC4Q8TDY8 1250 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 LMBR1Q8WVP7 490 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 SEPT1Q8WYJ6 367 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MAP4K1Q92918 833 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MRPL38Q96DV4 380 aaKnown RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 FAM122AQ96E09 287 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 IL17RAQ96F46 866 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 CTAGE1Q96RT6 745 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MIPEPQ99797 713 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 C11orf84Q9BUA3 381 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 GLT8D2Q9H1C3 349 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 IL25Q9H293 177 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 KCNF1Q9H3M0 494 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 RNPEPQ9H4A4 650 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 UBE2ZQ9H832 354 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-204ENST00000465167 LY9Q9HBG7 655 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 SETD4Q9NVD3 440 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 TUBE1Q9UJT0 475 aa6.58□□□□□ -1.36
SSBP1-204ENST00000465167 MRPL42Q9Y6G3 142 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms