RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 USP25Q9UHP3 1055 aa17.71■□□□□ 0.43
SSNA1-204ENST00000464553 AGO2Q9UKV8 859 aaKnown RBP17.71■□□□□ 0.43
SSNA1-204ENST00000464553 ZDHHC9Q9Y397 364 aa17.71■□□□□ 0.43
SSNA1-204ENST00000464553 PVALEFA0A1B0GWK0 134 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 SPDYE4A6NLX3 237 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 LACTBL1A8MY62 500 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 ANKRD63C9JTQ0 380 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 H7C4K7 107 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
SSNA1-204ENST00000464553 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
SSNA1-204ENST00000464553 DCXO43602 365 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 GPR37L1O60883 481 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 GCNT3O95395 438 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 CXCL8P10145 99 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 GARTP22102 1010 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 CMA1P23946 247 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 RAB33AQ14088 237 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 ENOX2Q16206 610 aaKnown RBP17.7■□□□□ 0.42
SSNA1-204ENST00000464553 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
SSNA1-204ENST00000464553 SEZ6Q53EL9 994 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 RARS2Q5T160 578 aaKnown RBP17.7■□□□□ 0.42
SSNA1-204ENST00000464553 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
SSNA1-204ENST00000464553 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 PLCD3Q8N3E9 789 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 APPL2Q8NEU8 664 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 SPATA32Q96LK8 384 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 MAN1C1Q9NR34 630 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 MTRRQ9UBK8 725 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 CACNG4Q9UBN1 327 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 KCNH3Q9ULD8 1083 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 C2CD2Q9Y426 696 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 VCANP13611 3396 aa17.7■□□□□ 0.42
SSNA1-204ENST00000464553 TGM5O43548 720 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 IL18RAPO95256 599 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 MYL1P05976 194 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 HNRNPA1P09651 372 aaKnown RBP eCLIP17.69■□□□□ 0.42
SSNA1-204ENST00000464553 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 SNRPFP62306 86 aaKnown RBP17.69■□□□□ 0.42
SSNA1-204ENST00000464553 SPATA1Q5VX52 437 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 PRSS55Q6UWB4 352 aaPredicted RBP17.69■□□□□ 0.42
SSNA1-204ENST00000464553 PALB2Q86YC2 1186 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 SYCP3Q8IZU3 236 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 C12orf76Q8N812 135 aaPredicted RBP17.69■□□□□ 0.42
SSNA1-204ENST00000464553 KREMEN2Q8NCW0 462 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 BEST2Q8NFU1 509 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 HASPINQ8TF76 798 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 LEO1Q8WVC0 666 aaPredicted RBP17.69■□□□□ 0.42
SSNA1-204ENST00000464553 POMGNT1Q8WZA1 660 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
SSNA1-204ENST00000464553 KIF12Q96FN5 646 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 SUSD3Q96L08 255 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 B3GALT6Q96L58 329 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 MAFFQ9ULX9 164 aa17.69■□□□□ 0.42
SSNA1-204ENST00000464553 SPTBN5Q9NRC6 3674 aaKnown RBP17.68■□□□□ 0.42
SSNA1-204ENST00000464553 CCDC195A0A1B0GUA6 201 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 EIF3DO15371 548 aaKnown RBP eCLIP17.68■□□□□ 0.42
SSNA1-204ENST00000464553 POU2F2P09086 479 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 ADSSP30520 456 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 HOXA9P31269 272 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 TNFSF9P41273 254 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 NUCB2P80303 420 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 MRPL58Q14197 206 aaKnown RBP17.68■□□□□ 0.42
SSNA1-204ENST00000464553 SLC8B1Q6J4K2 584 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 TMC5Q6UXY8 1006 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 UNC13DQ70J99 1090 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 CEP57L1Q8IYX8 460 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 ZDHHC14Q8IZN3 488 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 C3orf58Q8NDZ4 430 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 APOL5Q9BWW9 433 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 POMKQ9H5K3 350 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 BDP1A6H8Y1 2624 aa17.68■□□□□ 0.42
SSNA1-204ENST00000464553 ARHGEF37A1IGU5 675 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 M0QZQ0 153 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 ZMYND10O75800 440 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 BRCC3P46736 316 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.42
SSNA1-204ENST00000464553 ASIC1P78348 528 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 TMEM31Q5JXX7 168 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 OTOP3Q7RTS5 596 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 ZNF461Q8TAF7 563 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 ZNF507Q8TCN5 953 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 STAMQ92783 540 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 ACSF2Q96CM8 615 aaPredicted RBP17.67■□□□□ 0.42
SSNA1-204ENST00000464553 PRKD2Q9BZL6 878 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 KIAA1586Q9HCI6 787 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 TBC1D7Q9P0N9 293 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 FBXW11Q9UKB1 542 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 PCDHB8Q9UN66 801 aa17.67■□□□□ 0.42
SSNA1-204ENST00000464553 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
SSNA1-204ENST00000464553 FAM237AA0A1B0GTK4 181 aa17.66■□□□□ 0.42
SSNA1-204ENST00000464553 A0A1W2PQ27 194 aa17.66■□□□□ 0.42
SSNA1-204ENST00000464553 A0A1W2PQ64 194 aa17.66■□□□□ 0.42
SSNA1-204ENST00000464553 A0A1W2PQD8 194 aa17.66■□□□□ 0.42
SSNA1-204ENST00000464553 TBC1D4O60343 1298 aa17.66■□□□□ 0.42
SSNA1-204ENST00000464553 TKTP29401 623 aaKnown RBP17.66■□□□□ 0.42
SSNA1-204ENST00000464553 MCM4P33991 863 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms