RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ZNF263O14978 683 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 ABLIM3O94929 683 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 ATF2P15336 505 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 IGFBP6P24592 240 aaPredicted RBP15.93■□□□□ 0.14
SMC1A-204ENST00000463684 CNR2P34972 360 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 BRCC3P46736 316 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 ROR1Q01973 937 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 GLRA4Q5JXX5 417 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 IQCEQ6IPM2 695 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 CENPQQ7L2Z9 268 aaPredicted RBP15.93■□□□□ 0.14
SMC1A-204ENST00000463684 APBB1IPQ7Z5R6 666 aaPredicted RBP15.93■□□□□ 0.14
SMC1A-204ENST00000463684 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.93■□□□□ 0.14
SMC1A-204ENST00000463684 MAP4K3Q8IVH8 894 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 TCEAL8Q8IYN2 117 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 DEPTORQ8TB45 409 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 DEPDC1BQ8WUY9 529 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 SMARCD2Q92925 531 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 TCEAL4Q96EI5 215 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 ZNF512Q96ME7 567 aaPredicted RBP15.93■□□□□ 0.14
SMC1A-204ENST00000463684 PPP1R10Q96QC0 940 aaKnown RBP15.93■□□□□ 0.14
SMC1A-204ENST00000463684 USP20Q9Y2K6 914 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 DOCK6Q96HP0 2047 aa15.93■□□□□ 0.14
SMC1A-204ENST00000463684 ACACBO00763 2458 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 TPRP12270 2363 aaKnown RBP15.92■□□□□ 0.14
SMC1A-204ENST00000463684 WDR27A2RRH5 827 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 H7C4K7 107 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 KCNA4P22459 653 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 CCNE1P24864 410 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 KRT2P35908 639 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 SATB1Q01826 763 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 CD300LGQ6UXG3 332 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 VITQ6UXI7 678 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 SPEM1Q8N4L4 309 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 CSGALNACT1Q8TDX6 532 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 WASF1Q92558 559 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 NACC1Q96RE7 527 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 PDRG1Q9NUG6 133 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 STK36Q9NRP7 1315 aa15.92■□□□□ 0.14
SMC1A-204ENST00000463684 FAM205CA6NFA0 338 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 CHURC1-FNTBB4DL54 471 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 HRO43593 1189 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 NEMFO60524 1076 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 CHRNB1P11230 501 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 NAMPTP43490 491 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 FNTBP49356 437 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 YARSP54577 528 aaKnown RBP15.91■□□□□ 0.14
SMC1A-204ENST00000463684 SCRN1Q12765 414 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 NR5A1Q13285 461 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 LRRC32Q14392 662 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 PPP2R5AQ15172 486 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 EEF1DP3Q658K8 133 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 TPGS2Q68CL5 300 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 IL31Q6EBC2 164 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 LONP2Q86WA8 852 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 MFSD6LQ8IWD5 586 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 YAF2Q8IY57 180 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 C3orf58Q8NDZ4 430 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 ZSWIM3Q96MP5 696 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 TM6SF1Q9BZW5 370 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 CCDC113Q9H0I3 377 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 GOLGA2P5Q9HBQ8 144 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 SLC38A7Q9NVC3 462 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 INSL5Q9Y5Q6 135 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 ARID2Q68CP9 1835 aa15.91■□□□□ 0.14
SMC1A-204ENST00000463684 SMIM28A0A1B0GU29 152 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 SYN3O14994 580 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 GDF9O60383 454 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 SPATA31C1P0DKV0 1188 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 VIPR2P41587 438 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 CCR2P41597 374 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 EFNA5P52803 228 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 MLLT6P55198 1093 aaPredicted RBP15.9■□□□□ 0.14
SMC1A-204ENST00000463684 ATF7IP2Q5U623 682 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 CEP68Q76N32 757 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 CATSPER3Q86XQ3 398 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 LEMD2Q8NC56 503 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 BSNDQ8WZ55 320 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 E2F7Q96AV8 911 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 MSANTD3Q96H12 275 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 IFT74Q96LB3 600 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 GPR88Q9GZN0 384 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 TOPORSQ9NS56 1045 aaPredicted RBP15.9■□□□□ 0.14
SMC1A-204ENST00000463684 ORC3Q9UBD5 711 aaPredicted RBP15.9■□□□□ 0.14
SMC1A-204ENST00000463684 ANGPTL2Q9UKU9 493 aa15.9■□□□□ 0.14
SMC1A-204ENST00000463684 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 NRG2O14511 850 aaPredicted RBP15.89■□□□□ 0.13
SMC1A-204ENST00000463684 SEC24AO95486 1093 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 MYL4P12829 197 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 CYP11B2P19099 503 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 KPNA1P52294 538 aaPredicted RBP15.89■□□□□ 0.13
SMC1A-204ENST00000463684 DMWDQ09019 674 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 SRSF5Q13243 272 aaKnown RBP15.89■□□□□ 0.13
SMC1A-204ENST00000463684 PTGDRQ13258 359 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 CTXN3Q4LDR2 81 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 HEATR6Q6AI08 1181 aaKnown RBP15.89■□□□□ 0.13
SMC1A-204ENST00000463684 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 HS6ST3Q8IZP7 471 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 ZSCAN18Q8TBC5 510 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms