RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
APP-211ENST00000462267 KCNMB3Q9NPA1 279 aa16.87■□□□□ 0.29
APP-211ENST00000462267 VPS45Q9NRW7 570 aa16.87■□□□□ 0.29
APP-211ENST00000462267 C2orf42Q9NWW7 574 aa16.87■□□□□ 0.29
APP-211ENST00000462267 SPAG17Q6Q759 2223 aa16.86■□□□□ 0.29
APP-211ENST00000462267 ZBTB39O15060 712 aa16.86■□□□□ 0.29
APP-211ENST00000462267 CHADO15335 359 aa16.86■□□□□ 0.29
APP-211ENST00000462267 AKAP3O75969 853 aa16.86■□□□□ 0.29
APP-211ENST00000462267 ATF2P15336 505 aa16.86■□□□□ 0.29
APP-211ENST00000462267 TKTP29401 623 aaKnown RBP16.86■□□□□ 0.29
APP-211ENST00000462267 MPLP40238 635 aa16.86■□□□□ 0.29
APP-211ENST00000462267 RING1Q06587 406 aa16.86■□□□□ 0.29
APP-211ENST00000462267 ZNF252P-AS1Q0IIN9 211 aa16.86■□□□□ 0.29
APP-211ENST00000462267 FOXC1Q12948 553 aa16.86■□□□□ 0.29
APP-211ENST00000462267 KRT32Q14532 448 aa16.86■□□□□ 0.29
APP-211ENST00000462267 NTRK3Q16288 839 aa16.86■□□□□ 0.29
APP-211ENST00000462267 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
APP-211ENST00000462267 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
APP-211ENST00000462267 IQCEQ6IPM2 695 aa16.86■□□□□ 0.29
APP-211ENST00000462267 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
APP-211ENST00000462267 RALGPS2Q86X27 583 aaPredicted RBP16.86■□□□□ 0.29
APP-211ENST00000462267 YAF2Q8IY57 180 aa16.86■□□□□ 0.29
APP-211ENST00000462267 ELMOD1Q8N336 334 aa16.86■□□□□ 0.29
APP-211ENST00000462267 ZSCAN18Q8TBC5 510 aaPredicted RBP16.86■□□□□ 0.29
APP-211ENST00000462267 PRIMPOLQ96LW4 560 aa16.86■□□□□ 0.29
APP-211ENST00000462267 SLC26A6Q9BXS9 759 aa16.86■□□□□ 0.29
APP-211ENST00000462267 GPR88Q9GZN0 384 aa16.86■□□□□ 0.29
APP-211ENST00000462267 RGL1Q9NZL6 768 aa16.86■□□□□ 0.29
APP-211ENST00000462267 LHX6Q9UPM6 363 aa16.86■□□□□ 0.29
APP-211ENST00000462267 MYBPHLA2RUH7 354 aa16.85■□□□□ 0.29
APP-211ENST00000462267 SLC38A8A6NNN8 435 aa16.85■□□□□ 0.29
APP-211ENST00000462267 HEPACAM2A8MVW5 462 aa16.85■□□□□ 0.29
APP-211ENST00000462267 SLC37A4O43826 429 aa16.85■□□□□ 0.29
APP-211ENST00000462267 DGAT1O75907 488 aa16.85■□□□□ 0.29
APP-211ENST00000462267 RECQL4O94761 1208 aa16.85■□□□□ 0.29
APP-211ENST00000462267 GLRA2P23416 452 aa16.85■□□□□ 0.29
APP-211ENST00000462267 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
APP-211ENST00000462267 GATA6Q92908 595 aa16.85■□□□□ 0.29
APP-211ENST00000462267 ZC3H10Q96K80 434 aaKnown RBP16.85■□□□□ 0.29
APP-211ENST00000462267 CYP4F11Q9HBI6 524 aa16.85■□□□□ 0.29
APP-211ENST00000462267 SNTG2Q9NY99 539 aa16.85■□□□□ 0.29
APP-211ENST00000462267 INSL5Q9Y5Q6 135 aa16.85■□□□□ 0.29
APP-211ENST00000462267 SPECC1L-ADORA2AF8WAN1 911 aa16.84■□□□□ 0.29
APP-211ENST00000462267 M0R2N6 131 aa16.84■□□□□ 0.29
APP-211ENST00000462267 MOSPD3O75425 235 aa16.84■□□□□ 0.29
APP-211ENST00000462267 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
APP-211ENST00000462267 IFNAR1P17181 557 aa16.84■□□□□ 0.29
APP-211ENST00000462267 CTHP32929 405 aa16.84■□□□□ 0.29
APP-211ENST00000462267 SOX9P48436 509 aa16.84■□□□□ 0.29
APP-211ENST00000462267 EPHA5P54756 1037 aa16.84■□□□□ 0.29
APP-211ENST00000462267 FCHO2Q0JRZ9 810 aa16.84■□□□□ 0.29
APP-211ENST00000462267 CCINQ13939 588 aa16.84■□□□□ 0.29
APP-211ENST00000462267 CTTNQ14247 550 aaKnown RBP16.84■□□□□ 0.29
APP-211ENST00000462267 DAB2IPQ5VWQ8 1189 aa16.84■□□□□ 0.29
APP-211ENST00000462267 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
APP-211ENST00000462267 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
APP-211ENST00000462267 BLIDQ8IZY5 108 aa16.84■□□□□ 0.29
APP-211ENST00000462267 DYDC2Q96IM9 177 aa16.84■□□□□ 0.29
APP-211ENST00000462267 ZNF512Q96ME7 567 aaPredicted RBP16.84■□□□□ 0.29
APP-211ENST00000462267 UROC1Q96N76 676 aa16.84■□□□□ 0.29
APP-211ENST00000462267 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
APP-211ENST00000462267 SMOC1Q9H4F8 434 aa16.84■□□□□ 0.29
APP-211ENST00000462267 PRMT7Q9NVM4 692 aaPredicted RBP16.84■□□□□ 0.29
APP-211ENST00000462267 NCANO14594 1321 aa16.83■□□□□ 0.28
APP-211ENST00000462267 GIPC1O14908 333 aa16.83■□□□□ 0.28
APP-211ENST00000462267 N4BP3O15049 544 aa16.83■□□□□ 0.28
APP-211ENST00000462267 TBX3O15119 743 aa16.83■□□□□ 0.28
APP-211ENST00000462267 SEC24AO95486 1093 aa16.83■□□□□ 0.28
APP-211ENST00000462267 DSPP15924 2871 aaKnown RBP16.83■□□□□ 0.28
APP-211ENST00000462267 SPINK2P20155 84 aa16.83■□□□□ 0.28
APP-211ENST00000462267 IGFBP6P24592 240 aaPredicted RBP16.83■□□□□ 0.28
APP-211ENST00000462267 HOXC13P31276 330 aa16.83■□□□□ 0.28
APP-211ENST00000462267 CLCNKBP51801 687 aa16.83■□□□□ 0.28
APP-211ENST00000462267 UPP1Q16831 310 aa16.83■□□□□ 0.28
APP-211ENST00000462267 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
APP-211ENST00000462267 TPGS2Q68CL5 300 aa16.83■□□□□ 0.28
APP-211ENST00000462267 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
APP-211ENST00000462267 TXNDC11Q6PKC3 985 aa16.83■□□□□ 0.28
APP-211ENST00000462267 TPH2Q8IWU9 490 aa16.83■□□□□ 0.28
APP-211ENST00000462267 HS6ST3Q8IZP7 471 aa16.83■□□□□ 0.28
APP-211ENST00000462267 ZCCHC14Q8WYQ9 949 aaKnown RBP16.83■□□□□ 0.28
APP-211ENST00000462267 BRF1Q92994 677 aa16.83■□□□□ 0.28
APP-211ENST00000462267 EDEM2Q9BV94 578 aa16.83■□□□□ 0.28
APP-211ENST00000462267 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
APP-211ENST00000462267 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
APP-211ENST00000462267 MAFFQ9ULX9 164 aa16.83■□□□□ 0.28
APP-211ENST00000462267 C4orf47A7E2U8 309 aa16.82■□□□□ 0.28
APP-211ENST00000462267 EXTL3O43909 919 aa16.82■□□□□ 0.28
APP-211ENST00000462267 MYL4P12829 197 aa16.82■□□□□ 0.28
APP-211ENST00000462267 CEACAM1P13688 526 aa16.82■□□□□ 0.28
APP-211ENST00000462267 GCFC2P16383 781 aaKnown RBP16.82■□□□□ 0.28
APP-211ENST00000462267 CYP4A11Q02928 519 aa16.82■□□□□ 0.28
APP-211ENST00000462267 INF2Q27J81 1249 aa16.82■□□□□ 0.28
APP-211ENST00000462267 SH3PXD2AQ5TCZ1 1133 aa16.82■□□□□ 0.28
APP-211ENST00000462267 PPP4R3AQ6IN85 833 aa16.82■□□□□ 0.28
APP-211ENST00000462267 Q6ZUG5 572 aa16.82■□□□□ 0.28
APP-211ENST00000462267 DAGLBQ8NCG7 672 aa16.82■□□□□ 0.28
APP-211ENST00000462267 ADPGKQ9BRR6 497 aa16.82■□□□□ 0.28
APP-211ENST00000462267 FZD8Q9H461 694 aa16.82■□□□□ 0.28
APP-211ENST00000462267 PDZD7Q9H5P4 517 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms