RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 NFIBO00712 420 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 STRNO43815 780 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ALAS1P13196 640 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 NAT1P18440 290 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 FSTP19883 344 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 PDIA3P30101 505 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ARHGEF6Q15052 776 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 DHCR24Q15392 516 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ZNF792Q3KQV3 632 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 BRDTQ58F21 947 aaPredicted RBP9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 MBLAC2Q68D91 279 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 CDCA2Q69YH5 1023 aaPredicted RBP9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 RNF111Q6ZNA4 994 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 TMTC3Q6ZXV5 915 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 MICU3Q86XE3 530 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 CHST13Q8NET6 341 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 RAET1EQ8TD07 263 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 SOCS4Q8WXH5 440 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 TBC1D5Q92609 795 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 DIO2Q92813 273 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ZNF333Q96JL9 665 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 PIGSQ96S52 555 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ORAI3Q9BRQ5 295 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ALDH8A1Q9H2A2 487 aaPredicted RBP9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 LRRC4CQ9HCJ2 640 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 A1CFQ9NQ94 594 aaKnown RBP9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 RNF146Q9NTX7 359 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 PDRG1Q9NUG6 133 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 DUSP13Q9UII6 198 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 PCDHA11Q9Y5I1 949 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 CYP46A1Q9Y6A2 500 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 ZNF236Q9UL36 1845 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 NID2Q14112 1375 aa9.21□□□□□ -0.94
ECHDC1-212ENST00000461239 hCG_1642624A0A1W2PR95 340 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 TMEM82A0PJX8 343 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 ALG1L2C9J202 215 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 ZBTB5O15062 677 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 GSC2O15499 205 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 ZBTB43O43298 467 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 IGHA1P01876 353 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 H2AFB1P0C5Y9 115 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 FCER1AP12319 257 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 PAMP19021 973 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 FLT3P36888 993 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 RGS2P41220 211 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 CNTN2Q02246 1040 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 STRN3Q13033 797 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 IFI16Q16666 785 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 INF2Q27J81 1249 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 MAP3K21Q5TCX8 1036 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 IQCEQ6IPM2 695 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 RCBTB1Q8NDN9 531 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 PTCHD1Q96NR3 888 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 SPZ1Q9BXG8 430 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 C22orf23Q9BZE7 217 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 ACAD9Q9H845 621 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 CYP39A1Q9NYL5 469 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 TPCN1Q9ULQ1 816 aa9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 DDX49Q9Y6V7 483 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-212ENST00000461239 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 NPHP3-ACAD11A0A0J9YXS1 232 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 GOLGA8AA7E2F4 631 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 GOLGA8BA8MQT2 603 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 DTNBO60941 627 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 LARGE1O95461 756 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 ESR1P03372 595 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 S100BP04271 92 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CALM1P0DP23 149 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CALM2P0DP24 149 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CALM3P0DP25 149 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 COPB2P35606 906 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 RCAN1P53805 252 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 AK2P54819 239 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CACNB2Q08289 660 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 USH1GQ495M9 461 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 SLC9C1Q4G0N8 1177 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 PIK3R6Q5UE93 754 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 WWC2Q6AWC2 1192 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 LHFPL2Q6ZUX7 228 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 UBE2R2Q712K3 238 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 FAM133AQ8N9E0 248 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 TRPV1Q8NER1 839 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 ATL2Q8NHH9 583 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CTCFLQ8NI51 663 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 NETO1Q8TDF5 533 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 SHISA4Q96DD7 197 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 MAML3Q96JK9 1138 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 SAMD15Q9P1V8 674 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 ZNF281Q9Y2X9 895 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 SNX11Q9Y5W9 270 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 LCTP09848 1927 aa9.19□□□□□ -0.94
ECHDC1-212ENST00000461239 TRBV23OR9-2A0A075B6M9 112 aa9.18□□□□□ -0.94
ECHDC1-212ENST00000461239 SSU72P8A0A1W2PR75 194 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms