RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 BPIP17213 487 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 FSTL1Q12841 308 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 STRN3Q13033 797 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 VPS72Q15906 364 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 UGT8Q16880 541 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 PLEKHG4Q58EX7 1191 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 MRGPREQ86SM8 312 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 UNC5CLQ8IV45 518 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 UBR7Q8N806 425 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 PDCD2LQ9BRP1 358 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 TTPALQ9BTX7 342 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 LSM14BQ9BX40 385 aaKnown RBP6.33□□□□□ -1.4
FAM228B-201ENST00000460686 SPON1Q9HCB6 807 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.33□□□□□ -1.4
FAM228B-201ENST00000460686 CDY2AQ9Y6F7 541 aa6.33□□□□□ -1.4
FAM228B-201ENST00000460686 USP32Q8NFA0 1604 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 TMEM191CA6NGB0 347 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 GRXCR1A8MXD5 290 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 TRIM24O15164 1050 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 ULK1O75385 1050 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 ID4P47928 161 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 INHBEP58166 350 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 APBA1Q02410 837 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 ULK2Q8IYT8 1036 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 OR52N2Q8NGI0 321 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 EAF2Q96CJ1 260 aaPredicted RBP6.32□□□□□ -1.4
FAM228B-201ENST00000460686 POLR3GLQ9BT43 218 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 TOPORSQ9NS56 1045 aaPredicted RBP6.32□□□□□ -1.4
FAM228B-201ENST00000460686 EDARQ9UNE0 448 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
FAM228B-201ENST00000460686 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.32□□□□□ -1.4
FAM228B-201ENST00000460686 MARF1Q9Y4F3 1742 aaKnown RBP6.32□□□□□ -1.4
FAM228B-201ENST00000460686 TULP4Q9NRJ4 1543 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 ABHD16AO95870 558 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 APOBEC3AP31941 199 aaPredicted RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 SESN3P58005 492 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 PURAQ00577 322 aaKnown RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 MEF2AQ02078 507 aaPredicted RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 PDCD1Q15116 288 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 SMN1Q16637 294 aaKnown RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 TIGD2Q4W5G0 525 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 LY6G5CQ5SRR4 150 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 LAIR1Q6GTX8 287 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 ABHD15Q6UXT9 468 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 DOK3Q7L591 496 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 SLC41A1Q8IVJ1 513 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 CLRN3Q8NCR9 226 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 LENG9Q96B70 501 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 NDC1Q9BTX1 674 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 KCNH6Q9H252 994 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 BRD4O60885 1362 aaPredicted RBP6.31□□□□□ -1.4
FAM228B-201ENST00000460686 INSRP06213 1382 aa6.31□□□□□ -1.4
FAM228B-201ENST00000460686 MYBBP1AQ9BQG0 1328 aaKnown RBP6.3□□□□□ -1.4
FAM228B-201ENST00000460686 ZEB2O60315 1214 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 TMEM127O75204 238 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 PPFIA4O75335 1185 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 ITGA10O75578 1167 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 ITGB1P05556 798 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 PTPAQ15257 358 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.3□□□□□ -1.4
FAM228B-201ENST00000460686 RNF180Q86T96 592 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 THNSL2Q86YJ6 484 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 RPUSD2Q8IZ73 545 aaKnown RBP6.3□□□□□ -1.4
FAM228B-201ENST00000460686 MDM1Q8TC05 714 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 SNX33Q8WV41 574 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 ACAP3Q96P50 834 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 ZNF768Q9H5H4 540 aaKnown RBP6.3□□□□□ -1.4
FAM228B-201ENST00000460686 PANK3Q9H999 370 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 TRPM5Q9NZQ8 1165 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 DPP7Q9UHL4 492 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 FZD1Q9UP38 647 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 CLCA2Q9UQC9 943 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 DMRT1Q9Y5R6 373 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 PARD3Q8TEW0 1356 aa6.3□□□□□ -1.4
FAM228B-201ENST00000460686 GLI3P10071 1580 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 NR4A1P22736 598 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 CTSSP25774 331 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 SOX5P35711 763 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 PTTG1IPP53801 180 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 CDK17Q00537 523 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 FSCN1Q16658 493 aaKnown RBP6.29□□□□□ -1.4
FAM228B-201ENST00000460686 C19orf54Q5BKX5 351 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 CT47A1Q5JQC4 288 aaPredicted RBP6.29□□□□□ -1.4
FAM228B-201ENST00000460686 IQSEC1Q6DN90 963 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 LRRC55Q6ZSA7 311 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 STRA8Q7Z7C7 330 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
FAM228B-201ENST00000460686 PAWRQ96IZ0 340 aaKnown RBP6.29□□□□□ -1.4
FAM228B-201ENST00000460686 GPRC5DQ9NZD1 345 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 NWD2Q9ULI1 1742 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
FAM228B-201ENST00000460686 QRICH2Q9H0J4 1663 aa6.29□□□□□ -1.4
FAM228B-201ENST00000460686 RGPD8O14715 1765 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms