RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 C2CD4DB7Z1M9 353 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 I3L4J1 428 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 IDEP14735 1019 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 TKTP29401 623 aaKnown RBP17.55■□□□□ 0.4
COL7A1-203ENST00000459756 BRCC3P46736 316 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 ENOX2Q16206 610 aaKnown RBP17.55■□□□□ 0.4
COL7A1-203ENST00000459756 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-203ENST00000459756 SHC4Q6S5L8 630 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-203ENST00000459756 CCDC149Q6ZUS6 474 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 ANKS3Q6ZW76 656 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 CD302Q8IX05 232 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 PLCD3Q8N3E9 789 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 TDRD5Q8NAT2 981 aaKnown RBP17.55■□□□□ 0.4
COL7A1-203ENST00000459756 EDAQ92838 391 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 STRA6Q9BX79 667 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 TNMDQ9H2S6 317 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 TUBGCP4Q9UGJ1 667 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 EXOC7Q9UPT5 735 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 NUB1Q9Y5A7 615 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 BACE2Q9Y5Z0 518 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 STYXL1Q9Y6J8 313 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 C2orf16Q68DN1 1984 aa17.55■□□□□ 0.4
COL7A1-203ENST00000459756 LACTBL1A8MY62 500 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ANKRD63C9JTQ0 380 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 SYN3O14994 580 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 XPOTO43592 962 aaKnown RBP17.54■□□□□ 0.4
COL7A1-203ENST00000459756 RFPL2O75678 378 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ADRB2P07550 413 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 CYP3A5P20815 502 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 COL9A1P20849 921 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ME1P48163 572 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ALCAMQ13740 583 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 RAB33AQ14088 237 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ZBTB6Q15916 424 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 E2F4Q16254 413 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 PTPN21Q16825 1174 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ZBTB41Q5SVQ8 909 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ADALQ6DHV7 355 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 OTOP3Q7RTS5 596 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ZDHHC14Q8IZN3 488 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 IQUBQ8NA54 791 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 FEZF2Q8TBJ5 459 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 SMG7Q92540 1137 aaKnown RBP17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ZNF707Q96C28 371 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-203ENST00000459756 KIF12Q96FN5 646 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 PANK4Q9NVE7 773 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 CPSF3Q9UKF6 684 aaKnown RBP17.54■□□□□ 0.4
COL7A1-203ENST00000459756 UBQLN1Q9UMX0 589 aaKnown RBP17.54■□□□□ 0.4
COL7A1-203ENST00000459756 PCDHB13Q9Y5F0 798 aa17.54■□□□□ 0.4
COL7A1-203ENST00000459756 ADAM12O43184 909 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 ZMYND10O75800 440 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 MYBP10242 640 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 LRPAP1P30533 357 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 OR1D2P34982 312 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 ZXDAP98168 799 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 AMPD3Q01432 767 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 POU5F1Q01860 360 aaKnown RBP17.53■□□□□ 0.4
COL7A1-203ENST00000459756 SPAG1Q07617 926 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 POSTNQ15063 836 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
COL7A1-203ENST00000459756 LIN9Q5TKA1 542 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 CCDC65Q8IXS2 484 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 STAMQ92783 540 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 ACSF2Q96CM8 615 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-203ENST00000459756 SUSD3Q96L08 255 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 ACCSQ96QU6 501 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 PRKD2Q9BZL6 878 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
COL7A1-203ENST00000459756 KBTBD4Q9NVX7 518 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 TBC1D7Q9P0N9 293 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 AGO2Q9UKV8 859 aaKnown RBP17.53■□□□□ 0.4
COL7A1-203ENST00000459756 CDY1Q9Y6F8 540 aa17.53■□□□□ 0.4
COL7A1-203ENST00000459756 TISP43B9A030 160 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 GCNT3O95395 438 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL7A1-203ENST00000459756 MCM4P33991 863 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
COL7A1-203ENST00000459756 VARS2Q5ST30 1063 aaKnown RBP17.52■□□□□ 0.4
COL7A1-203ENST00000459756 POMGNT1Q8WZA1 660 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 DHX58Q96C10 678 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 MAGEF1Q9HAY2 307 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 PIDD1Q9HB75 910 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 FAM13BQ9NYF5 915 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 RCOR1Q9UKL0 485 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 PCDHA7Q9UN72 937 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 DERAQ9Y315 318 aa17.52■□□□□ 0.4
COL7A1-203ENST00000459756 CLUHO75153 1309 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 H7C4K7 107 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 HOXA9P31269 272 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 ACOT2P49753 483 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 CASP5P51878 434 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 KCNA1Q09470 495 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 UVSSAQ2YD98 709 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 PPM1LQ5SGD2 360 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 SLC8B1Q6J4K2 584 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 CNNM4Q6P4Q7 775 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms