RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TOX2Q96NM4 488 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 NOX5Q96PH1 765 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 POP1Q99575 1024 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ADAM2Q99965 735 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SNX25Q9H3E2 840 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 HIPK3Q9H422 1215 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 HAUS4Q9H6D7 363 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 C11orf49Q9H6J7 331 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 MINDY3Q9H8M7 445 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SCUBE2Q9NQ36 999 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRMT13Q9NUP7 481 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 FAM105AQ9NUU6 356 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 TMEM39AQ9NV64 488 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SNTG2Q9NY99 539 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 AIPL1Q9NZN9 384 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 OGDHLQ9ULD0 1010 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PADI3Q9ULW8 664 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 AGAP1Q9UPQ3 857 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ATP11BQ9Y2G3 1177 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 SIK3Q9Y2K2 1263 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 GIT1Q9Y2X7 761 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 COQ4Q9Y3A0 265 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 NOC2LQ9Y3T9 749 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 NUB1Q9Y5A7 615 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PCDHB4Q9Y5E5 795 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 PCDHB2Q9Y5E7 798 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 ANK1P16157 1881 aa6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 GOLGB1Q14789 3259 aaKnown RBP6.27□□□□□ -1.41
RNU1-88P-201ENST00000459274 RALGAPA2Q2PPJ7 1873 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 EIF3CLB5ME19 914 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TACC1O75410 805 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 C4BPAP04003 597 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 ITGB3P05106 788 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 ADRB2P07550 413 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 HSPA8P11142 646 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 RAG1P15918 1043 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CYP3A5P20815 502 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 POLR2BP30876 1174 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 HOXC8P31273 242 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CD52P31358 61 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CASQ1P31415 396 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 RPL9P32969 192 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 RFC2P35250 354 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TNFSF9P41273 254 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 MAGEA1P43355 309 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 GJA8P48165 433 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TAF6P49848 677 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 KIF11P52732 1056 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 ATN1P54259 1190 aaPredicted RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 NOP14P78316 857 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CLDN10P78369 228 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 IRX5P78411 483 aaPredicted RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 PPP3CAQ08209 521 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 KCNMA1Q12791 1236 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 STILQ15468 1287 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CBWD6Q4V339 395 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 EPC2Q52LR7 807 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 ODF2Q5BJF6 829 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CBWD3Q5JTY5 395 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 FAM26DQ5JW98 314 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 FBXO47Q5MNV8 452 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CBWD5Q5RIA9 395 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF618Q5T7W0 954 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 LIN9Q5TKA1 542 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 JADE1Q6IE81 842 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CCSAPQ6IQ19 270 aaPredicted RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRIM72Q6ZMU5 477 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 ZNF677Q86XU0 584 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 THEM5Q8N1Q8 247 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 APPL2Q8NEU8 664 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 KIAA1524Q8TCG1 905 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 UBE2Q2Q8WVN8 375 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CTNNBL1Q8WYA6 563 aaPredicted RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 HPDLQ96IR7 371 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TNIP3Q96KP6 325 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 UROC1Q96N76 676 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 EIF3CQ99613 913 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 HTATIP2Q9BUP3 242 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 MTMR12Q9C0I1 747 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 NIF3L1Q9GZT8 377 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRPV6Q9H1D0 765 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 MTIF3Q9H2K0 278 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 SYNCQ9H7C4 482 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 RSAD1Q9HA92 442 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CYP3A43Q9HB55 503 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 CDHR5Q9HBB8 845 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 PTPRHQ9HD43 1115 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 TRMT1Q9NXH9 659 aaKnown RBP6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 MYO1AQ9UBC5 1043 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 HESX1Q9UBX0 185 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 LCMT1Q9UIC8 334 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 KIAA1257Q9ULG3 409 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 PPP2R2CQ9Y2T4 447 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 IPPQ9Y573 584 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 PAXBP1Q9Y5B6 917 aa6.26□□□□□ -1.41
RNU1-88P-201ENST00000459274 UMODL1Q5DID0 1318 aa6.25□□□□□ -1.41
RNU1-88P-201ENST00000459274 A0A0U1RQF3 1178 aa6.25□□□□□ -1.41
RNU1-88P-201ENST00000459274 SOWAHDA6NJG2 315 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms