RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ABLIM3O94929 683 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 LRG1P02750 347 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 ID4P47928 161 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 SNW1Q13573 536 aaKnown RBP23.58■■□□□ 1.37
CPNE1-220ENST00000458038 MPZL3Q6UWV2 235 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 DTHD1Q6ZMT9 781 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 DAW1Q8N136 415 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 FOXQ1Q9C009 403 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 GOLGA2P5Q9HBQ8 144 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 MAFFQ9ULX9 164 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 KIF3AQ9Y496 699 aa23.58■■□□□ 1.37
CPNE1-220ENST00000458038 PODXLO00592 558 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 PRRG1O14668 218 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 SEC24BO95487 1268 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 RHOP08100 348 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 ATF2P15336 505 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 PROZP22891 400 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 IGFBP6P24592 240 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-220ENST00000458038 BRCC3P46736 316 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 TOB1P50616 345 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-220ENST00000458038 ROR1Q01973 937 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 SOX4Q06945 474 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-220ENST00000458038 ZNF528Q3MIS6 628 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 VARS2Q5ST30 1063 aaKnown RBP23.57■■□□□ 1.36
CPNE1-220ENST00000458038 TPGS2Q68CL5 300 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 RINT1Q6NUQ1 792 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 C1orf186Q6ZWK4 172 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 TCEAL8Q8IYN2 117 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 CEP120Q8N960 986 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 TARS2Q9BW92 718 aaKnown RBP23.57■■□□□ 1.36
CPNE1-220ENST00000458038 CNTN3Q9P232 1028 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-220ENST00000458038 R4GN57 208 aa23.57■■□□□ 1.36
CPNE1-220ENST00000458038 E9PMD0 336 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 ZNF197O14709 1029 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 NCAM2O15394 837 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 MICAL2O94851 1124 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 GUCY2CP25092 1073 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 OSTNP61366 133 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 STRN3Q13033 797 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 NBR1Q14596 966 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 ST13P5Q8NFI4 369 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-220ENST00000458038 FBXO4Q9UKT5 387 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 NUB1Q9Y5A7 615 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 PCDHB6Q9Y5E3 794 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 F5P12259 2224 aa23.56■■□□□ 1.36
CPNE1-220ENST00000458038 I3L4J1 428 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 TBC1D4O60343 1298 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 GLULP15104 373 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 SMTNP53814 917 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 MRPL58Q14197 206 aaKnown RBP23.55■■□□□ 1.36
CPNE1-220ENST00000458038 TAS1R3Q7RTX0 852 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 APPL2Q8NEU8 664 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 SPIRE2Q8WWL2 714 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 ZMAT2Q96NC0 199 aaKnown RBP23.55■■□□□ 1.36
CPNE1-220ENST00000458038 KXD1Q9BQD3 176 aa23.55■■□□□ 1.36
CPNE1-220ENST00000458038 MRPS17Q9Y2R5 130 aaKnown RBP23.55■■□□□ 1.36
CPNE1-220ENST00000458038 WDR27A2RRH5 827 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 FAM170BA6NMN3 283 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 LAMTOR5O43504 91 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 TOM1L1O75674 476 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 MAPK7Q13164 816 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 UBXN2BQ14CS0 331 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 ZBTB41Q5SVQ8 909 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 ELMOD1Q8N336 334 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 ING5Q8WYH8 240 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 ELSPBP1Q96BH3 223 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 MCRS1Q96EZ8 462 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 SUSD3Q96L08 255 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 RUSC1Q9BVN2 902 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 KCND2Q9NZV8 630 aa23.54■■□□□ 1.36
CPNE1-220ENST00000458038 ABLIM1O14639 778 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 SLC16A4O15374 487 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 HYIQ5T013 277 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 RUBCNQ92622 972 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 MMTAG2Q9BU76 263 aaKnown RBP23.53■■□□□ 1.36
CPNE1-220ENST00000458038 OXCT2Q9BYC2 517 aaPredicted RBP23.53■■□□□ 1.36
CPNE1-220ENST00000458038 PLEKHA5Q9HAU0 1116 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 CYP4F11Q9HBI6 524 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 LTB4R2Q9NPC1 389 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.53■■□□□ 1.36
CPNE1-220ENST00000458038 CEP250Q9BV73 2442 aa23.53■■□□□ 1.36
CPNE1-220ENST00000458038 PDCD11Q14690 1871 aaKnown RBP23.53■■□□□ 1.36
CPNE1-220ENST00000458038 H0YCG3 227 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 KINO60870 393 aaKnown RBP23.52■■□□□ 1.36
CPNE1-220ENST00000458038 PLS3P13797 630 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 RPS9P46781 194 aaKnown RBP23.52■■□□□ 1.36
CPNE1-220ENST00000458038 NOLC1Q14978 699 aaKnown RBP eCLIP23.52■■□□□ 1.363e-8■□□□□ 8.2
CPNE1-220ENST00000458038 SLC5A9Q2M3M2 681 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 CTXN3Q4LDR2 81 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 RILPL1Q5EBL4 403 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 ZNF280DQ6N043 979 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 ZPBP2Q6X784 338 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 ZNF852Q6ZMS4 543 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 LEMD2Q8NC56 503 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 DNASE1L2Q92874 299 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 CLDN23Q96B33 292 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 SPATA6Q9NWH7 488 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-220ENST00000458038 FBXL5Q9UKA1 691 aa23.52■■□□□ 1.36
CPNE1-220ENST00000458038 PP2D1A8MPX8 630 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms