RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 FAM170BA6NMN3 283 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ADAM12O43184 909 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 LAMTOR5O43504 91 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 RHOP08100 348 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 CLTAP09496 248 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 CPB1P15086 417 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ATF2P15336 505 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 SCP2P22307 547 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ABCD1P33897 745 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 MAGEA9P43362 315 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 MCM2P49736 904 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 LIG4P49917 911 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 TOB1P50616 345 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 STARD6P59095 220 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 NOLC1Q14978 699 aaKnown RBP eCLIP9.63□□□□□ -0.87
PKP4-207ENST00000457109 MLF2Q15773 248 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 XKR4Q5GH76 650 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 ZBTB41Q5SVQ8 909 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ARL6IP4Q66PJ3 421 aaKnown RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 SLC8B1Q6J4K2 584 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ZNF280DQ6N043 979 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ALKAL1Q6UXT8 129 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 RSPO2Q6UXX9 243 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 DSTYKQ6XUX3 929 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 C1orf186Q6ZWK4 172 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 SYT2Q8N9I0 419 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 ITFG1Q8TB96 612 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 SPIRE2Q8WWL2 714 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ING5Q8WYH8 240 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 SNX27Q96L92 541 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 PLIN2Q99541 437 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 KXD1Q9BQD3 176 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 PLEKHA5Q9HAU0 1116 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ZFP14Q9HCL3 533 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 SPATA6Q9NWH7 488 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 ARHGAP28Q9P2N2 729 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 SMC3Q9UQE7 1217 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
PKP4-207ENST00000457109 TRIOO75962 3097 aa9.63□□□□□ -0.87
PKP4-207ENST00000457109 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 PP2D1A8MPX8 630 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
PKP4-207ENST00000457109 SLC26A4O43511 780 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ECI2O75521 394 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 FAM13AO94988 1023 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 BMP15O95972 392 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 PLA2G4BP0C869 781 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 PAX3P23760 479 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ATP2C1P98194 919 aaPredicted RBP9.62□□□□□ -0.87
PKP4-207ENST00000457109 ROR1Q01973 937 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 PPP2R3AQ06190 1150 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
PKP4-207ENST00000457109 PPP2R5DQ14738 602 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 LARP1BQ659C4 914 aaKnown RBP9.62□□□□□ -0.87
PKP4-207ENST00000457109 ARMCX5Q6P1M9 558 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ZPBP2Q6X784 338 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ZNF852Q6ZMS4 543 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 CEP120Q8N960 986 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 LEMD2Q8NC56 503 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 PJA1Q8NG27 643 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
PKP4-207ENST00000457109 FAM212AQ96EL1 285 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 KIF12Q96FN5 646 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 AK8Q96MA6 479 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 TBC1D32Q96NH3 1257 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 TSPAN18Q96SJ8 248 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 RPP25Q9BUL9 199 aaKnown RBP9.62□□□□□ -0.87
PKP4-207ENST00000457109 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 OSBPL6Q9BZF3 934 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ZHX3Q9H4I2 956 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 BRD9Q9H8M2 597 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 PTPRHQ9HD43 1115 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 HCFC1R1Q9NWW0 138 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 CNTN3Q9P232 1028 aa9.62□□□□□ -0.87
PKP4-207ENST00000457109 ZDBF2Q9HCK1 2354 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 MAN2B1O00754 1011 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 KINO60870 393 aaKnown RBP9.61□□□□□ -0.87
PKP4-207ENST00000457109 TBCAO75347 108 aaKnown RBP9.61□□□□□ -0.87
PKP4-207ENST00000457109 MICAL2O94851 1124 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 ABLIM3O94929 683 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 EDN1P05305 212 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 SP9P0CG40 484 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 GJB2P29033 226 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 ALDH1A3P47895 512 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 ID4P47928 161 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 EPHB3P54753 998 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 YWHAHQ04917 246 aaPredicted RBP9.61□□□□□ -0.87
PKP4-207ENST00000457109 ADCY1Q08828 1119 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 PLD1Q13393 1074 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 TAF12Q16514 161 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 HAUS6Q7Z4H7 955 aa9.61□□□□□ -0.87
PKP4-207ENST00000457109 CD302Q8IX05 232 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms