RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 MUC3AQ02505 3323 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 ANK1P16157 1881 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 A0A0B4J269 797 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 C2CD4DB7Z1M9 353 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 ANKRD63C9JTQ0 380 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 XPOTO43592 962 aaKnown RBP17.66■□□□□ 0.42
CPSF6-203ENST00000456847 GPR37L1O60883 481 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 RFPL2O75678 378 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
CPSF6-203ENST00000456847 LIN9Q5TKA1 542 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 ADALQ6DHV7 355 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 SLFN12LQ6IEE8 588 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 SHC4Q6S5L8 630 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 CCDC65Q8IXS2 484 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 CMASQ8NFW8 434 aaPredicted RBP17.66■□□□□ 0.42
CPSF6-203ENST00000456847 CLSTN3Q9BQT9 956 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 TNMDQ9H2S6 317 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 CUEDC2Q9H467 287 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 UBQLN1Q9UMX0 589 aaKnown RBP17.66■□□□□ 0.42
CPSF6-203ENST00000456847 TTC26A0AVF1 554 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 LACTBL1A8MY62 500 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 TISP43B9A030 160 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 C1RP00736 705 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 COL9A1P20849 921 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 ENOX2Q16206 610 aaKnown RBP17.65■□□□□ 0.42
CPSF6-203ENST00000456847 CD300LGQ6UXG3 332 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 ANKS3Q6ZW76 656 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 SMG7Q92540 1137 aaKnown RBP17.65■□□□□ 0.42
CPSF6-203ENST00000456847 ACCSQ96QU6 501 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 C11orf16Q9NQ32 467 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 FAM13BQ9NYF5 915 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 MTRRQ9UBK8 725 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.65■□□□□ 0.42
CPSF6-203ENST00000456847 C5orf42Q9H799 3197 aa17.65■□□□□ 0.42
CPSF6-203ENST00000456847 L1TD1Q5T7N2 865 aaKnown RBP17.64■□□□□ 0.42
CPSF6-203ENST00000456847 SYCP3Q8IZU3 236 aa17.64■□□□□ 0.42
CPSF6-203ENST00000456847 IQUBQ8NA54 791 aa17.64■□□□□ 0.42
CPSF6-203ENST00000456847 POMGNT1Q8WZA1 660 aa17.64■□□□□ 0.42
CPSF6-203ENST00000456847 OLFML3Q9NRN5 406 aa17.64■□□□□ 0.42
CPSF6-203ENST00000456847 ZDHHC7Q9NXF8 308 aa17.64■□□□□ 0.42
CPSF6-203ENST00000456847 FBXW11Q9UKB1 542 aa17.64■□□□□ 0.42
CPSF6-203ENST00000456847 AGO2Q9UKV8 859 aaKnown RBP17.64■□□□□ 0.42
CPSF6-203ENST00000456847 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.41
CPSF6-203ENST00000456847 FAM189A1O60320 539 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 PPP1R37O75864 691 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 OR1D2P34982 312 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 ACOT2P49753 483 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 AMPD3Q01432 767 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 ALCAMQ13740 583 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 E2F4Q16254 413 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 LILRA6Q6PI73 481 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 ACSF2Q96CM8 615 aaPredicted RBP17.64■□□□□ 0.41
CPSF6-203ENST00000456847 CPSF3Q9UKF6 684 aaKnown RBP17.64■□□□□ 0.41
CPSF6-203ENST00000456847 PCDHA7Q9UN72 937 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 PCDHB13Q9Y5F0 798 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 CDY1Q9Y6F8 540 aa17.64■□□□□ 0.41
CPSF6-203ENST00000456847 ADAM12O43184 909 aa17.63■□□□□ 0.41
CPSF6-203ENST00000456847 ASIC1P78348 528 aa17.63■□□□□ 0.41
CPSF6-203ENST00000456847 VARS2Q5ST30 1063 aaKnown RBP17.63■□□□□ 0.41
CPSF6-203ENST00000456847 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
CPSF6-203ENST00000456847 CYP26C1Q6V0L0 522 aa17.63■□□□□ 0.41
CPSF6-203ENST00000456847 CD302Q8IX05 232 aa17.63■□□□□ 0.41
CPSF6-203ENST00000456847 BEST2Q8NFU1 509 aa17.63■□□□□ 0.41
CPSF6-203ENST00000456847 IKZF4Q9H2S9 585 aa17.63■□□□□ 0.41
CPSF6-203ENST00000456847 FRMD3A2A2Y4 597 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 PRR33A8MZF0 331 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 SYN3O14994 580 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 POLR2DO15514 142 aaKnown RBP17.62■□□□□ 0.41
CPSF6-203ENST00000456847 ZMYND10O75800 440 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 CYP3A5P20815 502 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 CASP5P51878 434 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 POSTNQ15063 836 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 PTPN21Q16825 1174 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 PPM1LQ5SGD2 360 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 JADE1Q6IE81 842 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 STXBP4Q6ZWJ1 553 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 OTOP3Q7RTS5 596 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 EDAQ92838 391 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 TSPAN18Q96SJ8 248 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 USTQ9Y2C2 406 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 BACE2Q9Y5Z0 518 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 CLUHO75153 1309 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 H7C4K7 107 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 C8AP07357 584 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 LRPAP1P30533 357 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 GUCY2FP51841 1108 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 ZXDAP98168 799 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 KCNA1Q09470 495 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 RAB33AQ14088 237 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 TMEM132DQ14C87 1099 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 STRA6Q9BX79 667 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 PRKD2Q9BZL6 878 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 MAGEF1Q9HAY2 307 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 KBTBD4Q9NVX7 518 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 STYXL1Q9Y6J8 313 aa17.62■□□□□ 0.41
CPSF6-203ENST00000456847 NFICP08651 508 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 GBP2P32456 591 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms