RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 WRAP73Q9P2S5 460 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 COL4A3BPQ9Y5P4 624 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 CICQ96RK0 1608 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 MYO7AQ13402 2215 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 OTOFQ9HC10 1997 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SUPT3HO75486 399 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 FUCA1P04066 466 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 PDGFRBP09619 1106 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 MUTP22033 750 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SSTR1P30872 391 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SKIV2L2P42285 1042 aaKnown RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 GPX6P59796 221 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 CDKL1Q00532 357 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 TBC1D10BQ4KMP7 808 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 IZUMO2Q6UXV1 221 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ILDR2Q71H61 639 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 NLRP9Q7RTR0 991 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SPATA24Q86W54 205 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ZBTB38Q8NAP3 1195 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM210AQ96ND0 272 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 LRRC37BQ96QE4 947 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF184Q99676 751 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC38A7Q9NVC3 462 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 EYA4O95677 639 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 H2AFZP0C0S5 128 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 THRAP10827 490 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 WNT7BP56706 349 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 GSTM4Q03013 218 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 COASYQ13057 564 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 NADK2Q4G0N4 442 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 OLFML2BQ68BL8 750 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 RNF43Q68DV7 783 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 UGT2A3Q6UWM9 527 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 H2AFVQ71UI9 128 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 VSIG1Q86XK7 387 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 COL23A1Q86Y22 540 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SNX29P2Q8IUI4 249 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 TRIM42Q8IWZ5 723 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 FGD4Q96M96 766 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 VAT1LQ9HCJ6 419 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 KCNK9Q9NPC2 374 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 CNTN3Q9P232 1028 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ANKFY1Q9P2R3 1169 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 GMPR2Q9P2T1 348 aaKnown RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ANAPC4Q9UJX5 808 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF804BA4D1E1 1349 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 WNK3Q9BYP7 1800 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM237BA0A1B0GVD1 139 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SPTLC1O15269 473 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SUN1O94901 812 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 AGTP01019 485 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 GSTT2P0CG29 244 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 GSTT2BP0CG30 244 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 RBP3P10745 1247 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ARSAP15289 507 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 CYP7A1P22680 504 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 HALP42357 657 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 TNNC1P63316 161 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 PHEXP78562 749 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 THOC5Q13769 683 aaKnown RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 DCAF6Q58WW2 860 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 NANOGP8Q6NSW7 305 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 LRRC8CQ8TDW0 803 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 U2AF1L4Q8WU68 220 aaKnown RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 LENG9Q96B70 501 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 PRICKLE1Q96MT3 831 aaPredicted RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 DDX43Q9NXZ2 648 aaKnown RBP4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ATXN10Q9UBB4 475 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 HEY2Q9UBP5 337 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 ASTN1O14525 1302 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 MYO3BQ8WXR4 1341 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 DUOX1Q9NRD9 1551 aa4.83□□□□□ -1.64
DEPDC1-202ENST00000456315 TCRBV7S3A2A0A539 114 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 EXOC3O60645 756 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 F7P08709 466 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SPATA31C1P0DKV0 1188 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CDH2P19022 906 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SSR1P43307 286 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CDK7P50613 346 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 OXCT1P55809 520 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SETQ01105 290 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 IFITM3Q01628 133 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TFAP4Q01664 338 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PPP3CAQ08209 521 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SH3D19Q5HYK7 790 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 UNC13DQ70J99 1090 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ARMC9Q7Z3E5 817 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC125Q86Z20 511 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TNS4Q8IZW8 715 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PIGBQ92521 554 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 RUBCNQ92622 972 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 LRRC4BQ9NT99 713 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SAMD15Q9P1V8 674 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PCYOX1Q9UHG3 505 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 BARX2Q9UMQ3 279 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms