RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 ANKRD40Q6AI12 368 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 USP50Q70EL3 339 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 IRF2BP1Q8IU81 584 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 UTP4Q969X6 686 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MAGOHBQ96A72 148 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 OLFM3Q96PB7 478 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TUBGCP5Q96RT8 1024 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 NRDE2Q9H7Z3 1164 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 ETNK2Q9NVF9 386 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 HOXC10Q9NYD6 342 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 IL1RAPL1Q9NZN1 696 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CLEC11AQ9Y240 323 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 KIAA1217Q5T5P2 1943 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 NPHP3-ACAD11A0A0J9YXS1 232 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SLITRK3O94933 977 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 GJB6O95452 261 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 LMNAP02545 664 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 PORP16435 677 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 EPHX2P34913 555 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 VHLP40337 213 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 COPB1P53618 953 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 PSMC1P62191 440 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MRPS9P82933 396 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 KRT72Q14CN4 511 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TMEM132BQ14DG7 1078 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 PGM5Q15124 567 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 GPR162Q16538 588 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MUM1Q2TAK8 710 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MAP7D1Q3KQU3 841 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 LIN52Q52LA3 116 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 ARSHQ5FYA8 562 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 WDR59Q6PJI9 974 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 NIPA1Q7RTP0 329 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SCUBE1Q8IWY4 988 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 GUF1Q8N442 669 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CSGALNACT2Q8N6G5 542 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SYT2Q8N9I0 419 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 DIS3LQ8TF46 1054 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 DYDC2Q96IM9 177 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 RMDN3Q96TC7 470 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 RIT2Q99578 217 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 HSD17B14Q9BPX1 270 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 ELAC2Q9BQ52 826 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CENPKQ9BS16 269 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TEKT3Q9BXF9 490 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 WDR11Q9BZH6 1224 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 VPS16Q9H269 839 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TUFT1Q9NNX1 390 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 KCNH7Q9NS40 1196 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 NMRK1Q9NWW6 199 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TAB2Q9NYJ8 693 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 ZNF214Q9UL59 606 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 INTUQ9ULD6 942 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 FRMD4BQ9Y2L6 1034 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 USP15Q9Y4E8 981 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SPO11Q9Y5K1 396 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 FRMPD4Q14CM0 1322 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 LOC285556D6RIA3 1793 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ATP2A1O14983 1001 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 LSM1O15116 133 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 SART1O43290 800 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ATP9AO75110 1047 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MMEP08473 750 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 EEF1GP26641 437 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MATR3P43243 847 aaKnown RBP eCLIP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CACNB1Q02641 598 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CUL1Q13616 776 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 BAATQ14032 418 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CTTNQ14247 550 aaKnown RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 RCN2Q14257 317 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 LRRC41Q15345 812 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TKFCQ3LXA3 575 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 SMUG1Q53HV7 270 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 FAM26FQ5R3K3 315 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ARHGEF16Q5VV41 709 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 CENPPQ6IPU0 288 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TPH2Q8IWU9 490 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 AGGF1Q8N302 714 aaeCLIP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 IFT81Q8WYA0 676 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TMEM237Q96Q45 408 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TCHPQ9BT92 498 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TEX13BQ9BXU2 312 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 ISCUQ9H1K1 167 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 SEMA6BQ9H3T3 888 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 RXFP1Q9HBX9 757 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PXMP2Q9NR77 195 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PKD2L1Q9P0L9 805 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MAGEC2Q9UBF1 373 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PCDHB8Q9UN66 801 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 TFR2Q9UP52 801 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 PCDHB13Q9Y5F0 798 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 UBIAD1Q9Y5Z9 338 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MYH11P35749 1972 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MYPNQ86TC9 1320 aa8.12□□□□□ -1.11
HDAC9-218ENST00000456174 MYH10P35580 1976 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms