RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 SERHL2Q9H4I8 314 aa4.88□□□□□ -1.63
R3HDM1-212ENST00000456040 DKK2Q9UBU2 259 aa4.88□□□□□ -1.63
R3HDM1-212ENST00000456040 COX11Q9Y6N1 276 aa4.88□□□□□ -1.63
R3HDM1-212ENST00000456040 MYBBP1AQ9BQG0 1328 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-212ENST00000456040 KATNA1O75449 491 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 CFIP05156 583 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 KRT85P78386 507 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 CREMQ03060 361 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 MTM1Q13496 603 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 FAM50AQ14320 339 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 SPDYE7PQ495Y7 208 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 COLEC12Q5KU26 742 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 PAPD7Q5XG87 772 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 MAPKAPK5Q8IW41 473 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 ZCRB1Q8TBF4 217 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 HDAC10Q969S8 669 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 MYOCQ99972 504 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 CCDC8Q9H0W5 538 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 RNPEPQ9H4A4 650 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 KLHL11Q9NVR0 708 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 ANKFY1Q9P2R3 1169 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 SLC23A1Q9UHI7 598 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 TUBD1Q9UJT1 453 aa4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 RUVBL1Q9Y265 456 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-212ENST00000456040 MARCH11A6NNE9 402 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 GABRDO14764 452 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 C5AR1P21730 350 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 ZEB1P37275 1124 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 RGS19P49795 217 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 ATP8B2P98198 1209 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 RESTQ13127 1097 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 UBE3BQ7Z3V4 1068 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 RSPH3Q86UC2 560 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 PNMA8AQ86V59 439 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 LCORLQ8N3X6 602 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 ZGPATQ8N5A5 531 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 RSAD1Q9HA92 442 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDH12Q9NPG4 1184 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 TDP1Q9NUW8 608 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 MAP3K2Q9Y2U5 619 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 COL4A3BPQ9Y5P4 624 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 SPATA31A6Q5VVP1 1343 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 COL4A3Q01955 1670 aa4.86□□□□□ -1.63
R3HDM1-212ENST00000456040 A0A1B0GTW7 788 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 GRID2IPA4D2P6 1211 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 UNC119BA6NIH7 251 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHGA12O60330 932 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 CDKL5O76039 1030 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 FOSP01100 380 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 GCSHP23434 173 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 AVPR1BP47901 424 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 CTXN1P60606 82 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 DACT2Q5SW24 774 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 TMEM132CQ8N3T6 1108 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 FITM2Q8N6M3 262 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 ADAM2Q99965 735 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 GSTO2Q9H4Y5 243 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 FBXO34Q9NWN3 711 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 RNF181Q9P0P0 153 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHGA9Q9Y5G4 932 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHGA8Q9Y5G5 932 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHGA7Q9Y5G6 932 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHGA6Q9Y5G7 932 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHGA3Q9Y5H0 932 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 PCDHA13Q9Y5I0 950 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 NOX1Q9Y5S8 564 aa4.85□□□□□ -1.63
R3HDM1-212ENST00000456040 WASHC2CQ9Y4E1 1318 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 PIPSLA2A3N6 862 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 FZD9O00144 591 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 KIAA0391O15091 583 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 SGTAO43765 313 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 SPDEFO95238 335 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 ELANEP08246 267 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 CKBP12277 381 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 SLC6A2P23975 617 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 CCND1P24385 295 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 EVA1CP58658 441 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 BLOC1S1P78537 153 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 CDC42EP1Q00587 391 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 TP53BP2Q13625 1128 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 PCBP2Q15366 365 aaKnown RBP eCLIP4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 PTPN21Q16825 1174 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 ABHD17BQ5VST6 288 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 EFCAB2Q5VUJ9 269 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 PPP4R3AQ6IN85 833 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 FOXR2Q6PJQ5 311 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 Q6YL49 198 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 CMTR2Q8IYT2 770 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 FAM43AQ8N2R8 423 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 TMX3Q96JJ7 454 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 TEKT5Q96M29 485 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 COQ10AQ96MF6 247 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 ALOXE3Q9BYJ1 711 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 SLC13A1Q9BZW2 595 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 C11orf54Q9H0W9 315 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 SPEF1Q9Y4P9 236 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 INSL6Q9Y581 213 aa4.84□□□□□ -1.63
R3HDM1-212ENST00000456040 TCRBV7S2A1N4TA0A589 114 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms