RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 DEFB129Q9H1M3 183 aa13.68□□□□□ -0.22
LINC00473-202ENST00000455853 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
LINC00473-202ENST00000455853 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
LINC00473-202ENST00000455853 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
LINC00473-202ENST00000455853 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 TP73O15350 636 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 PRPF4O43172 522 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 CYP26A1O43174 497 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 CFBP00751 764 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 KRT16P08779 473 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 ADCY8P40145 1251 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 YARSP54577 528 aaKnown RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 BPIFB4P59827 614 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 RASA2Q15283 850 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 PPM1KQ8N3J5 372 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 FITM2Q8N6M3 262 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 PITPNM3Q9BZ71 974 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 DDTLA6NHG4 134 aaPredicted RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 ABLIM1O14639 778 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 TAC1P20366 129 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 CHKAP35790 457 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 POLGP54098 1239 aaPredicted RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 SNAP25P60880 206 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 KYNUQ16719 465 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 UBAP2Q5T6F2 1119 aaKnown RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 BZW1Q7L1Q6 419 aaKnown RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 FAM160B2Q86V87 743 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 C1orf54Q8WWF1 131 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 MXRA8Q9BRK3 442 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 RANBP17Q9H2T7 1088 aaKnown RBP13.67□□□□□ -0.22
LINC00473-202ENST00000455853 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 ANAPC7Q9UJX3 599 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 NAALADL1Q9UQQ1 740 aa13.67□□□□□ -0.22
LINC00473-202ENST00000455853 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
LINC00473-202ENST00000455853 ABCD1P33897 745 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 NCKAP1LP55160 1127 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 GCNT1Q02742 428 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 FSTL1Q12841 308 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 TRIM72Q6ZMU5 477 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 SLC47A2Q86VL8 602 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 ZCCHC9Q8N567 271 aaKnown RBP13.66□□□□□ -0.22
LINC00473-202ENST00000455853 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 FBXL13Q8NEE6 735 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 HELQQ8TDG4 1101 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 DDX1Q92499 740 aaKnown RBP13.66□□□□□ -0.22
LINC00473-202ENST00000455853 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
LINC00473-202ENST00000455853 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 EURLQ9NYK6 297 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 CORO1CQ9ULV4 474 aaPredicted RBP13.66□□□□□ -0.22
LINC00473-202ENST00000455853 L3MBTL1Q9Y468 752 aa13.66□□□□□ -0.22
LINC00473-202ENST00000455853 DICER1Q9UPY3 1922 aaKnown RBP13.66□□□□□ -0.22
LINC00473-202ENST00000455853 ZBTB39O15060 712 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
LINC00473-202ENST00000455853 RNASELQ05823 741 aaKnown RBP13.65□□□□□ -0.22
LINC00473-202ENST00000455853 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 LIN9Q5TKA1 542 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 GDAP1Q8TB36 358 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 CBWD1Q9BRT8 395 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 TUBB6Q9BUF5 446 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 SSU72Q9NP77 194 aaKnown RBP13.65□□□□□ -0.22
LINC00473-202ENST00000455853 WRAP73Q9P2S5 460 aaPredicted RBP13.65□□□□□ -0.22
LINC00473-202ENST00000455853 HERC5Q9UII4 1024 aaKnown RBP13.65□□□□□ -0.22
LINC00473-202ENST00000455853 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 NEU2Q9Y3R4 380 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 GJA3Q9Y6H8 435 aa13.65□□□□□ -0.22
LINC00473-202ENST00000455853 A0A1W2PRG0 241 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 RASA4BC9J798 803 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 PPP1R12AO14974 1030 aaPredicted RBP13.64□□□□□ -0.23
LINC00473-202ENST00000455853 RASA4O43374 803 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 PROSCO94903 275 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 HTRA3P83110 453 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 SNX1Q13596 522 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 STRIP1Q5VSL9 837 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 IZUMO3Q5VZ72 239 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 DRICH1Q6PGQ1 229 aaPredicted RBP13.64□□□□□ -0.23
LINC00473-202ENST00000455853 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 VSIG1Q86XK7 387 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 ECHDC2Q86YB7 292 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 RHOT1Q8IXI2 618 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 NIM1KQ8IY84 436 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 SRRM1Q8IYB3 904 aaKnown RBP13.64□□□□□ -0.23
LINC00473-202ENST00000455853 KATNAL2Q8IYT4 538 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 MCOLN2Q8IZK6 566 aa13.64□□□□□ -0.23
LINC00473-202ENST00000455853 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms