RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 NPLOC4Q8TAT6 608 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ZNF564Q8TBZ8 553 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 TINF2Q9BSI4 451 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 NFKBIZQ9BYH8 718 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 MTMR12Q9C0I1 747 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CARD9Q9H257 536 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 PLEKHA4Q9H4M7 779 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 VIPAS39Q9H9C1 493 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 IFT122Q9HBG6 1241 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 EPB41L5Q9HCM4 733 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ZCCHC17Q9NP64 241 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 UVRAGQ9P2Y5 699 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CNOT8Q9UFF9 292 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 CNTN6Q9UQ52 1028 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 TNFSF13BQ9Y275 285 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 A0A087WZ62 844 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 A0A0U1RQG5 324 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 MIF4GDA9UHW6 222 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 H3BQF6 201 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 H3BRB1 525 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CCDC188H7C350 402 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 POLR3GO15318 223 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 CLSTN1O94985 981 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 CYP1A1P04798 512 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 ITGA4P13612 1032 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 PHKA2P46019 1235 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 MYL6P60660 151 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 OSTNP61366 133 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 GUCY2DQ02846 1103 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 GABPB1Q06547 395 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 GPS2Q13227 327 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ACVR2BQ13705 512 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CST9Q5W186 159 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 IQSEC1Q6DN90 963 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 MTHFD1LQ6UB35 978 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 MCOLN2Q8IZK6 566 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CEP120Q8N960 986 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CPA5Q8WXQ8 436 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ALG3Q92685 438 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ZBTB9Q96C00 473 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 FDXACB1Q9BRP7 624 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 IMPG2Q9BZV3 1241 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CDT1Q9H211 546 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ABHD16BQ9H3Z7 469 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 TUT1Q9H6E5 874 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 PRDM10Q9NQV6 1147 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 PRMT7Q9NVM4 692 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 COL1A2P08123 1366 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 ZSCAN5CA6NGD5 496 aaPredicted RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 SLC15A5A6NIM6 579 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 GPR25O00155 361 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 SART1O43290 800 aaKnown RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 B4GALT4O60513 344 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 CSDE1O75534 798 aaKnown RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 FGGP02679 453 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 CFHP08603 1231 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 HOXC6P09630 235 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 CARSP49589 748 aaKnown RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 PEX5P50542 639 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 TFAMQ00059 246 aaKnown RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 ZNF211Q13398 564 aaPredicted RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 FAM187BQ17R55 369 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 SGSM1Q2NKQ1 1148 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 NAA35Q5VZE5 725 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.89
RPE-216ENST00000454822 IFNLR1Q8IU57 520 aaPredicted RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 UBL4BQ8N7F7 174 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 RBBP8NLQ8NC74 664 aaPredicted RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 KRT35Q92764 455 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 CYFIP2Q96F07 1278 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 RNPC3Q96LT9 517 aaKnown RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 ZSWIM1Q9BR11 485 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 ZHX1Q9UKY1 873 aaPredicted RBP9.46□□□□□ -0.89
RPE-216ENST00000454822 HPCAL4Q9UM19 191 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 AKT3Q9Y243 479 aa9.46□□□□□ -0.89
RPE-216ENST00000454822 ESYT3A0FGR9 886 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 VTNP04004 478 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 TMOD1P28289 359 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 GNA15P30679 374 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 EPHB4P54760 987 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 TRPC3Q13507 836 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 AMHR2Q16671 573 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 CPNE8Q86YQ8 564 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 EFCAB13Q8IY85 973 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 TMEM192Q8IY95 271 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 UBR7Q8N806 425 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 OR6J1Q8NGC5 347 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 CASKIN2Q8WXE0 1202 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 IFT81Q8WYA0 676 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 CD101Q93033 1021 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 DDX47Q9H0S4 455 aaKnown RBP9.46□□□□□ -0.9
RPE-216ENST00000454822 WNT8AQ9H1J5 351 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 ACBD3Q9H3P7 528 aa9.46□□□□□ -0.9
RPE-216ENST00000454822 RPF1Q9H9Y2 349 aaKnown RBP9.46□□□□□ -0.9
RPE-216ENST00000454822 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.9
RPE-216ENST00000454822 CPA4Q9UI42 421 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms