RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 TMEM174Q8WUU8 243 aa16.73■□□□□ 0.27
TRA2B-205ENST00000453386 RBM15Q96T37 977 aaKnown RBP eCLIP16.73■□□□□ 0.271e-17■■■■■ 28.3
TRA2B-205ENST00000453386 TCEAL9Q9UHQ7 104 aa16.73■□□□□ 0.27
TRA2B-205ENST00000453386 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
TRA2B-205ENST00000453386 TBX20Q9UMR3 447 aa16.73■□□□□ 0.27
TRA2B-205ENST00000453386 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
TRA2B-205ENST00000453386 DHX15O43143 795 aaKnown RBP16.72■□□□□ 0.27
TRA2B-205ENST00000453386 ENTPD3O75355 529 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 STAT4Q14765 748 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 HP1BP3Q5SSJ5 553 aaPredicted RBP16.72■□□□□ 0.27
TRA2B-205ENST00000453386 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 RNF43Q68DV7 783 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 POMGNT1Q8WZA1 660 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 ADAM22Q9P0K1 906 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 ADGRA3Q8IWK6 1321 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 FAM47DPA6NHR8 397 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 SKAP2O75563 359 aaPredicted RBP16.72■□□□□ 0.27
TRA2B-205ENST00000453386 SLC1A1P43005 524 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 NSFP46459 744 aaKnown RBP16.72■□□□□ 0.27
TRA2B-205ENST00000453386 DNAJC3Q13217 504 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 SETDB1Q15047 1291 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 UGCGQ16739 394 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
TRA2B-205ENST00000453386 CCPG1Q9ULG6 757 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
TRA2B-205ENST00000453386 EXOC1LA0A1B0GW35 172 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 DENND3A2RUS2 1198 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 UNC5CO95185 931 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 CD58P19256 250 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 MAGEA4P43358 317 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 WDR4P57081 412 aaKnown RBP16.71■□□□□ 0.27
TRA2B-205ENST00000453386 CENPCQ03188 943 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 SPP2Q13103 211 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 TEX2Q8IWB9 1127 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 ZNF570Q96NI8 536 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.27
TRA2B-205ENST00000453386 EP400Q96L91 3159 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 CLRN2A0PK11 232 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 UNGP13051 313 aaPredicted RBP16.71■□□□□ 0.27
TRA2B-205ENST00000453386 ATP2A2P16615 1042 aaKnown RBP16.71■□□□□ 0.27
TRA2B-205ENST00000453386 SSTR3P32745 418 aaPredicted RBP16.71■□□□□ 0.27
TRA2B-205ENST00000453386 SNRPFP62306 86 aaKnown RBP16.71■□□□□ 0.27
TRA2B-205ENST00000453386 P3H1Q32P28 736 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 TKFCQ3LXA3 575 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 MAB21L3Q8N8X9 362 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 BBOF1Q8ND07 529 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 KCNV2Q8TDN2 545 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 ERP27Q96DN0 273 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 FAM81BQ96LP2 452 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 SAYSD1Q9NPB0 183 aa16.71■□□□□ 0.27
TRA2B-205ENST00000453386 NPTX2P47972 431 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 NCKAP1LP55160 1127 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 CCNG2Q16589 344 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 BZW1Q7L1Q6 419 aaKnown RBP16.71■□□□□ 0.26
TRA2B-205ENST00000453386 ANKLE1Q8NAG6 615 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 SPOCK2Q92563 424 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 ADAM33Q9BZ11 813 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 OSBPL8Q9BZF1 889 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 TRIM6Q9C030 488 aaPredicted RBP16.71■□□□□ 0.26
TRA2B-205ENST00000453386 MYLK2Q9H1R3 596 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 ST6GALNAC4Q9H4F1 302 aa16.71■□□□□ 0.26
TRA2B-205ENST00000453386 AGO4Q9HCK5 861 aaKnown RBP16.71■□□□□ 0.26
TRA2B-205ENST00000453386 LRRC37AA6NMS7 1700 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 NFIBO00712 420 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 CCNB1P14635 433 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 SOX10P56693 466 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 DMP1Q13316 513 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-205ENST00000453386 MTMR1Q13613 665 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 KAZNQ674X7 775 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 LMBRD2Q68DH5 695 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-205ENST00000453386 USP37Q86T82 979 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 PASD1Q8IV76 773 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 RAB3IPQ96QF0 476 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-205ENST00000453386 C11orf70Q9BRQ4 267 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 HOMER2Q9NSB8 354 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 C1orf112Q9NSG2 853 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 TXLNGQ9NUQ3 528 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 KLHL11Q9NVR0 708 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 SYNPO2Q9UMS6 1093 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 KRT15P19012 456 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 CPXCR1Q8N123 301 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 SLCO1B3Q9NPD5 702 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
TRA2B-205ENST00000453386 AVENQ9NQS1 362 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-205ENST00000453386 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
TRA2B-205ENST00000453386 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
TRA2B-205ENST00000453386 LY75O60449 1722 aa16.69■□□□□ 0.26
TRA2B-205ENST00000453386 PROSCO94903 275 aa16.69■□□□□ 0.26
TRA2B-205ENST00000453386 TAS2R40P59535 323 aa16.69■□□□□ 0.26
TRA2B-205ENST00000453386 CYP24A1Q07973 514 aa16.69■□□□□ 0.26
TRA2B-205ENST00000453386 KLF1Q13351 362 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms