RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 TOPORSQ9NS56 1045 aaPredicted RBP9.5□□□□□ -0.89
RFX3-209ENST00000451859 CHST7Q9NS84 486 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
RFX3-209ENST00000451859 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
RFX3-209ENST00000451859 ZNF638Q14966 1978 aaKnown RBP9.5□□□□□ -0.89
RFX3-209ENST00000451859 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 K7ENM7 598 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 B3GAT3O94766 335 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 FAM13AO94988 1023 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 BMP15O95972 392 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 SYT1P21579 422 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 GBP2P32456 591 aaPredicted RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 BRCC3P46736 316 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 SOX4Q06945 474 aaPredicted RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 SPAG1Q07617 926 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 RESTQ13127 1097 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 NOLC1Q14978 699 aaKnown RBP eCLIP9.49□□□□□ -0.89
RFX3-209ENST00000451859 ARSHQ5FYA8 562 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 SUGP1Q8IWZ8 645 aaKnown RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 MYCT1Q8N699 235 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 C3orf58Q8NDZ4 430 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 TMEM161BQ8NDZ6 487 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 ST13P5Q8NFI4 369 aaPredicted RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 SPIRE2Q8WWL2 714 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 C18orf25Q96B23 403 aaPredicted RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 ACSF2Q96CM8 615 aaPredicted RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 SNX27Q96L92 541 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 ZMAT2Q96NC0 199 aaKnown RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 ACAP3Q96P50 834 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 PPP1R10Q96QC0 940 aaKnown RBP9.49□□□□□ -0.89
RFX3-209ENST00000451859 C17orf75Q9HAS0 396 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 PTPRHQ9HD43 1115 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.49□□□□□ -0.89
RFX3-209ENST00000451859 SORCS3Q9UPU3 1222 aa9.49□□□□□ -0.89
RFX3-209ENST00000451859 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 PODXLO00592 558 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 ABLIM1O14639 778 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 ADAM12O43184 909 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 TBCAO75347 108 aaKnown RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 TOM1L1O75674 476 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 BRD1O95696 1058 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 PDGFBP01127 241 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 CXCL8P10145 99 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 MCF2P10911 925 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 PROZP22891 400 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 TKTP29401 623 aaKnown RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 LONP1P36776 959 aaKnown RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 LIG4P49917 911 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 CREMQ03060 361 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 SIGLEC14Q08ET2 396 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 ELAVL2Q12926 359 aaKnown RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 MTMR3Q13615 1198 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 FOXD4L5Q5VV16 416 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 DCLRE1AQ6PJP8 1040 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 C15orf39Q6ZRI6 1047 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 USP49Q70CQ1 688 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 GET4Q7L5D6 327 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 HAUS6Q7Z4H7 955 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 LNX1Q8TBB1 728 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 FOXD4L4Q8WXT5 416 aaPredicted RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 RAD54LQ92698 747 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 EPSTI1Q96J88 318 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 MFSD14AQ96MC6 490 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 CLIC6Q96NY7 704 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 CLSTN3Q9BQT9 956 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 BLOC1S4Q9NUP1 217 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 KCND2Q9NZV8 630 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 FNIP2Q9P278 1114 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 LARSQ9P2J5 1176 aaKnown RBP9.48□□□□□ -0.89
RFX3-209ENST00000451859 TUBGCP4Q9UGJ1 667 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 DPP7Q9UHL4 492 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 POLIQ9UNA4 740 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 CLUHO75153 1309 aa9.48□□□□□ -0.89
RFX3-209ENST00000451859 HNRNPDLO14979 420 aaKnown RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 CCL16O15467 120 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 CLDN3O15551 220 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 MEFVO15553 781 aaPredicted RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 C8AP07357 584 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 OR1D2P34982 312 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 TNFSF9P41273 254 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 SLC19A1P41440 591 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 NCKAP1LP55160 1127 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 ARPP19P56211 112 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PRR20EP86478 221 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PRR20CP86479 221 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PRR20DP86480 221 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PRR20BP86481 221 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PRR20AP86496 221 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PTPAQ15257 358 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 UPP1Q16831 310 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 PPM1LQ5SGD2 360 aa9.47□□□□□ -0.89
RFX3-209ENST00000451859 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
RFX3-209ENST00000451859 OTOP3Q7RTS5 596 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms