RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SOX4Q06945 474 aaPredicted RBP18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 CAMK4Q16566 473 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 ALKAL1Q6UXT8 129 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 HAUS6Q7Z4H7 955 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 DDX12PQ92771 950 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 ZMAT2Q96NC0 199 aaKnown RBP18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 TTPALQ9BTX7 342 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 TOPORSQ9NS56 1045 aaPredicted RBP18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 KCNG1Q9UIX4 513 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 ODF2LQ9ULJ1 636 aa18.58■□□□□ 0.56
PRPF40A-204ENST00000450303 MYMKA6NI61 221 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 I3L4J1 428 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 MEFVO15553 781 aaPredicted RBP18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 TGM5O43548 720 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 TBCAO75347 108 aaKnown RBP18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 RFPL2O75678 378 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 B3GAT3O94766 335 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 ASIC1P78348 528 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 CNNM4Q6P4Q7 775 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 CD300LGQ6UXG3 332 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 HFE2Q6ZVN8 426 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 DYMQ7RTS9 669 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 CCDC65Q8IXS2 484 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 LNX1Q8TBB1 728 aaPredicted RBP18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 SMARCE1Q969G3 411 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 BICD1Q96G01 975 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 SNX27Q96L92 541 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 TRIM9Q9C026 710 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 HAPLN2Q9GZV7 340 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 FNIP2Q9P278 1114 aa18.57■□□□□ 0.56
PRPF40A-204ENST00000450303 DENND4AQ7Z401 1863 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 PVALEFA0A1B0GWK0 134 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 K7ENM7 598 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 TOM1L1O75674 476 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 IDEP14735 1019 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 BRCC3P46736 316 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 PNOCQ13519 176 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 NOLC1Q14978 699 aaKnown RBP eCLIP18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 PSMD5Q16401 504 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 PTPN21Q16825 1174 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 UPP1Q16831 310 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 XKR4Q5GH76 650 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 DCLRE1AQ6PJP8 1040 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 TRIM67Q6ZTA4 783 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 GRAMD1CQ8IYS0 662 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 TDRD5Q8NAT2 981 aaKnown RBP18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 C3orf58Q8NDZ4 430 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 C18orf25Q96B23 403 aaPredicted RBP18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 CLSTN3Q9BQT9 956 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 BLZF1Q9H2G9 400 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 RMND1Q9NWS8 449 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 LIMD1Q9UGP4 676 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 HCN4Q9Y3Q4 1203 aa18.56■□□□□ 0.56
PRPF40A-204ENST00000450303 TMEM221A6NGB7 291 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 M0R296 226 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 CLDN3O15551 220 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 ADAM12O43184 909 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 GAP43P17677 238 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 NMT1P30419 496 aaKnown RBP18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 DPYDQ12882 1025 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 CUL4BQ13620 913 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 SLC10A6Q3KNW5 377 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 LILRA6Q6PI73 481 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 ZPBP2Q6X784 338 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 UNC13DQ70J99 1090 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 GPR65Q8IYL9 337 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 TMEM130Q8N3G9 435 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 KREMEN2Q8NCW0 462 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 PIK3R5Q8WYR1 880 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 UROC1Q96N76 676 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 GSDMAQ96QA5 445 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 GTPBP4Q9BZE4 634 aaKnown RBP18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 PARVGQ9HBI0 331 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 PANK4Q9NVE7 773 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 TMEM63CQ9P1W3 806 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 KIAA1468Q9P260 1216 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 DPP7Q9UHL4 492 aa18.55■□□□□ 0.56
PRPF40A-204ENST00000450303 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 H0YCG3 227 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 TMEM189-UBE2V1I3L0A0 370 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 ASGR2P07307 311 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 PRR29P0C7W0 189 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 KCNE1P15382 129 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 LIG4P49917 911 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 ZNF131P52739 623 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 CREMQ03060 361 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 SPAG1Q07617 926 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 MCL1Q07820 350 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 ELAVL2Q12926 359 aaKnown RBP18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 ELMSAN1Q6PJG2 1045 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 C15orf39Q6ZRI6 1047 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 CCDC149Q6ZUS6 474 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 SMG7Q92540 1137 aaKnown RBP18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 DNAJC19Q96DA6 116 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 SMOC2Q9H3U7 446 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 EXOC1Q9NV70 894 aa18.54■□□□□ 0.56
PRPF40A-204ENST00000450303 CNTN3Q9P232 1028 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms