RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 UAP1L1Q3KQV9 507 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 MCMDC2Q4G0Z9 681 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 PIP4P1Q86T03 277 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 C11orf74Q86VG3 221 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 TICAM2Q86XR7 235 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 CAMKK1Q8N5S9 505 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 CSGALNACT1Q8TDX6 532 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 ZNF668Q96K58 619 aaPredicted RBP8.86□□□□□ -0.99
LINC01961-201ENST00000449954 COLEC11Q9BWP8 271 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 HCFC1R1Q9NWW0 138 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 C2orf42Q9NWW7 574 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 PGPEP1Q9NXJ5 209 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 MAFBQ9Y5Q3 323 aaPredicted RBP8.86□□□□□ -0.99
LINC01961-201ENST00000449954 ASCC3Q8N3C0 2202 aaKnown RBP8.86□□□□□ -0.99
LINC01961-201ENST00000449954 BAZ2BQ9UIF8 2168 aaKnown RBP8.86□□□□□ -0.99
LINC01961-201ENST00000449954 PCNX2A6NKB5 2137 aa8.86□□□□□ -0.99
LINC01961-201ENST00000449954 PDCD11Q14690 1871 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 SF3B1O75533 1304 aaKnown RBP eCLIP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 NOTCH4Q99466 2003 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 A0A087WV48 116 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 SPAARA0A1B0GVQ0 90 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 ARNTLO00327 626 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 ATG13O75143 517 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 CSDE1O75534 798 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 MICAL2O94851 1124 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 RHOP08100 348 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 CEBPBP17676 345 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 PXNP49023 591 aaPredicted RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 AFF1P51825 1210 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 KPNA1P52294 538 aaPredicted RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 RAB15P59190 212 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 CCINQ13939 588 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 CEP55Q53EZ4 464 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 AXDND1Q5T1B0 1012 aaPredicted RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 SWSAP1Q6NVH7 229 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 MRPL10Q7Z7H8 261 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 ZNF410Q86VK4 478 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 RALGPS2Q86X27 583 aaPredicted RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 ZNF843Q8N446 348 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 B3GALT6Q96L58 329 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 ASB16Q96NS5 453 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 GPR62Q9BZJ7 368 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 KRT23Q9C075 422 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 PSTPIP2Q9H939 334 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 AGO4Q9HCK5 861 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 NXF1Q9UBU9 619 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 SEC63Q9UGP8 760 aaKnown RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 EVLQ9UI08 416 aaPredicted RBP8.85□□□□□ -0.99
LINC01961-201ENST00000449954 ADAM28Q9UKQ2 775 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 SLC8A2Q9UPR5 921 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 TEX15Q9BXT5 2789 aa8.85□□□□□ -0.99
LINC01961-201ENST00000449954 MYH9P35579 1960 aaKnown RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 CCDC194A0A1B0GVG4 234 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 MYBPHLA2RUH7 354 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 CAPN9O14815 690 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 EXTL3O43909 919 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 PRKCSHP14314 528 aaPredicted RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 DHX9Q08211 1270 aaKnown RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 SEMA3BQ13214 749 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 SLC5A9Q2M3M2 681 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 FAM78AQ5JUQ0 283 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 VITQ6UXI7 678 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 CCNI2Q6ZMN8 369 aaPredicted RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 CATSPER4Q7RTX7 472 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 CYP2U1Q7Z449 544 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 SMAP1Q8IYB5 467 aaPredicted RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 TMEFF1Q8IYR6 380 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 MEIOBQ8N635 442 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 CNNM3Q8NE01 707 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 MDM1Q8TC05 714 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 NUP205Q92621 2012 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 E2F7Q96AV8 911 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 RRP36Q96EU6 259 aaKnown RBP8.84□□□□□ -0.99
LINC01961-201ENST00000449954 SPZ1Q9BXG8 430 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 AGPAT5Q9NUQ2 364 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 TCEAL9Q9UHQ7 104 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 PCDHA6Q9UN73 950 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 PCDHA8Q9Y5H6 950 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 EML5Q05BV3 1969 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 MYO9AB2RTY4 2548 aa8.84□□□□□ -0.99
LINC01961-201ENST00000449954 URB1O60287 2271 aaKnown RBP8.83□□□□□ -1
LINC01961-201ENST00000449954 A0A0D9SFI3 127 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 SPECC1L-ADORA2AF8WAN1 911 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 DDX39AO00148 427 aaKnown RBP8.83□□□□□ -1
LINC01961-201ENST00000449954 ZNF197O14709 1029 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 MAN1A2O60476 641 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 ABCG1P45844 678 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 CBLBQ13191 982 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 SEC23AQ15436 765 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 PSMD5Q16401 504 aa8.83□□□□□ -1
LINC01961-201ENST00000449954 WDR44Q5JSH3 913 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms