RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 DDX56Q9NY93 547 aaKnown RBP12.19□□□□□ -0.46
SHANK2-211ENST00000449833 MLXQ9UH92 298 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 MMP1P03956 469 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 ROR1Q01973 937 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 PTH1RQ03431 593 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 BBS7Q8IWZ6 715 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 TMA16Q96EY4 203 aaKnown RBP12.19□□□□□ -0.46
SHANK2-211ENST00000449833 PLEKHA8Q96JA3 519 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 SRPRBQ9Y5M8 271 aaKnown RBP12.19□□□□□ -0.46
SHANK2-211ENST00000449833 COL17A1Q9UMD9 1497 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-211ENST00000449833 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.462e-13■■□□□ 12.7
SHANK2-211ENST00000449833 SRGAP2O75044 1071 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
SHANK2-211ENST00000449833 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 PPM1NQ8N819 430 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 PAGR1Q9BTK6 254 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 NUP85Q9BW27 656 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 SMARCAL1Q9NZC9 954 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 SNX24Q9Y343 169 aa12.19□□□□□ -0.46
SHANK2-211ENST00000449833 TTLL1O95922 423 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 APOA4P06727 396 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 WARSP23381 471 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 BTN3A2P78410 334 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 KIAA1841Q6NSI8 718 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 CCDC33Q8N5R6 958 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 PIK3C3Q8NEB9 887 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 RANBP17Q9H2T7 1088 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 MRPL39Q9NYK5 338 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 PLCG1P19174 1290 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 JADE3Q92613 823 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 PFDN2Q9UHV9 154 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 AP3B1O00203 1094 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 AP1G2O75843 785 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 CYP27A1Q02318 531 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 MAPRE1Q15691 268 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 STXBP2Q15833 593 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 NMD3Q96D46 503 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 MMADHCQ9H3L0 296 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 C8orf4Q9NR00 106 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 UBXN8O00124 270 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 CD58P19256 250 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 HEATR6Q6AI08 1181 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 ITPRIPL1Q6GPH6 555 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 ACAP3Q96P50 834 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 PLCL2Q9UPR0 1127 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 STAT5AP42229 794 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 STAT5BP51692 787 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 AKAP14Q86UN6 197 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 ZBED8Q8IZ13 594 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 NUP93Q8N1F7 819 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 DIS3LQ8TF46 1054 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 INPP5DQ92835 1189 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 WDR12Q9GZL7 423 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 SF3B1O75533 1304 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 USP1O94782 785 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 CCDC182A6NF36 153 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 MYBL1P10243 752 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 CCDC137Q6PK04 289 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 PCIF1Q9H4Z3 704 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 NOL6Q9H6R4 1146 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 CD248Q9HCU0 757 aa12.18□□□□□ -0.46
SHANK2-211ENST00000449833 RPRD1BQ9NQG5 326 aaKnown RBP12.18□□□□□ -0.46
SHANK2-211ENST00000449833 IGF2BP3O00425 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 FKBP6O75344 327 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 GMFBP60983 142 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 TFDP2Q14188 446 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 STAT4Q14765 748 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 RAB42Q8N4Z0 105 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 CLHC1Q8NHS4 586 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 NPR2P20594 1047 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 TYK2P29597 1187 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 MAGEA2P43356 314 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 MYO1GB0I1T2 1018 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 O00370 1275 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 CCNE1P24864 410 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 STK4Q13043 487 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 P3H2Q8IVL5 708 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 ATF4P18848 351 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 RAP1GAPP47736 663 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 PLOD1Q02809 727 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 RMND5BQ96G75 393 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 SARS2Q9NP81 518 aaKnown RBP12.17□□□□□ -0.46
SHANK2-211ENST00000449833 TUBGCP4Q9UGJ1 667 aa12.17□□□□□ -0.46
SHANK2-211ENST00000449833 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms