RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 HIST1H2AGP0C0S8 130 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 HIST1H2ADP20671 130 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 CYP2C19P33261 490 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 SESN2P58004 480 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 DEUP1Q05D60 604 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 SGSM1Q2NKQ1 1148 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 TEDDM1Q5T9Z0 273 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 SDE2Q6IQ49 451 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 RRM2BQ7LG56 351 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 ANKMY2Q8IV38 441 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 HIST1H2AHQ96KK5 128 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 HIST1H2AJQ99878 128 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 H2AFJQ9BTM1 129 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 SPATA31A6Q5VVP1 1343 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 TTC26A0AVF1 554 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 FOXN1O15353 648 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 ZSCAN9O15535 394 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 PSMD3O43242 534 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 PCYT1AP49585 367 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 ARHGEF7Q14155 803 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 MEI1Q5TIA1 1274 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 GRAMD4Q6IC98 578 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 EFCAB12Q6NXP0 572 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 SHC4Q6S5L8 630 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 VCPKMTQ9H867 229 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 HAUS5O94927 633 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 GFAPP14136 432 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 FCGRTP55899 365 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 ATF7IP2Q5U623 682 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 PLA2G4FQ68DD2 849 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 RCOR2Q8IZ40 523 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 REEP2Q9BRK0 252 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 GLI2P10070 1586 aa14.73□□□□□ -0.05
RAPGEF3-205ENST00000449771 TEX33O43247 280 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 IL18RAPO95256 599 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 CYP2C9P11712 490 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ZNF507Q8TCN5 953 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 HPS3Q969F9 1004 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 FAM167BQ9BTA0 163 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 DPEP1P16444 411 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ACTR2P61160 394 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 NBPF9Q3BBW0 867 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 TGS1Q96RS0 853 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 MAD2L2Q9UI95 211 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 PDGFRAP16234 1089 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 HMOX2P30519 316 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 PABPC5Q96DU9 382 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ARHGEF40Q8TER5 1519 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 CAMTA2O94983 1202 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ARFIP2P53365 341 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 STYK1Q6J9G0 422 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 DHX40Q8IX18 779 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 MOV10L1Q9BXT6 1211 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 TMEM39BQ9GZU3 492 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ZFATQ9P243 1243 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 PAIP2BQ9ULR5 123 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ENO4A6NNW6 628 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 PDCLQ13371 301 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 SNRNP35Q16560 246 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 PKN3Q6P5Z2 889 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 SENP7Q9BQF6 1050 aa14.72□□□□□ -0.05
RAPGEF3-205ENST00000449771 ESYT3A0FGR9 886 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 AP3B1O00203 1094 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 PDHA1P08559 390 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 BRAFP15056 766 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 GGCXP38435 758 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 C16orf86Q6ZW13 317 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 LRRC71Q8N4P6 559 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 HDAC6Q9UBN7 1215 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 APEX2Q9UBZ4 518 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 RASSF10A6NK89 507 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SF3B3Q15393 1217 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 HIF1AQ16665 826 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 CHST13Q8NET6 341 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SCFD1Q8WVM8 642 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 OTUB1Q96FW1 271 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 ELMO2Q96JJ3 720 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 MCEEQ96PE7 176 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 PALMDQ9NP74 551 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 ZNF711Q9Y462 761 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SNX5Q9Y5X3 404 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 ALDH1A3P47895 512 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 FLOT2Q14254 428 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 KCNB1Q14721 858 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SBK1Q52WX2 424 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 NPTXRO95502 500 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SEMA3FQ13275 785 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 KRT72Q14CN4 511 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 RNF180Q86T96 592 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 PATL1Q86TB9 770 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 OTULINQ96BN8 352 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 PHF20Q9BVI0 1012 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SELENONQ9NZV5 590 aa14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 WARS2Q9UGM6 360 aaKnown RBP14.71□□□□□ -0.05
RAPGEF3-205ENST00000449771 SPATA31A1Q5TZJ5 1347 aa14.71□□□□□ -0.06
RAPGEF3-205ENST00000449771 MYBP10242 640 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms