RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 MB21D2Q8IYB1 491 aaPredicted RBP8.18□□□□□ -1.1
RBM39-218ENST00000449489 RDM1Q8NG50 284 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 PIK3R5Q8WYR1 880 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 CCDC51Q96ER9 411 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 CLSTN3Q9BQT9 956 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 PLA2G2FQ9BZM2 168 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 DISC1Q9NRI5 854 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 SUCLA2Q9P2R7 463 aaPredicted RBP8.18□□□□□ -1.1
RBM39-218ENST00000449489 GIT1Q9Y2X7 761 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 SAMM50Q9Y512 469 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
RBM39-218ENST00000449489 COL4A2P08572 1712 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 SMCO2A6NFE2 343 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 WNT7AO00755 349 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 AKAP3O75969 853 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 ITGA4P13612 1032 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 CEACAM1P13688 526 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 AXLP30530 894 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 JAK3P52333 1124 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 NAPAP54920 295 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 LRRC32Q14392 662 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 SF3A2Q15428 464 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 TANGO2Q6ICL3 276 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 CEP68Q76N32 757 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 CACNA2D4Q7Z3S7 1137 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 RHPN2Q8IUC4 686 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 EXOC8Q8IYI6 725 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 CMTR1Q8N1G2 835 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 DEPDC4Q8N2C3 294 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 SYNPOQ8N3V7 929 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 FANCBQ8NB91 859 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 PGBD1Q96JS3 809 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 TMEM87BQ96K49 555 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 ZC3H10Q96K80 434 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 RIT2Q99578 217 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 TRMT61BQ9BVS5 477 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 ARRDC1-AS1Q9H2J1 176 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 BRD9Q9H8M2 597 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 ZNF334Q9HCZ1 680 aaPredicted RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 VPS45Q9NRW7 570 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 BARHL2Q9NY43 387 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 DNMT3BQ9UBC3 853 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 NDRG2Q9UN36 371 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 MRPS23Q9Y3D9 190 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 SF3B1O75533 1304 aaKnown RBP eCLIP8.17□□□□□ -1.17e-7■□□□□ 9.5
RBM39-218ENST00000449489 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
RBM39-218ENST00000449489 URB1O60287 2271 aaKnown RBP8.17□□□□□ -1.1
RBM39-218ENST00000449489 hCG_1642624A0A1W2PR95 340 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 CCDC69A6NI79 296 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 CCL16O15467 120 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 STBD1O95210 358 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 PSMC3P17980 439 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 RPL17P18621 184 aaKnown RBP8.16□□□□□ -1.1
RBM39-218ENST00000449489 CSRP1P21291 193 aaKnown RBP8.16□□□□□ -1.1
RBM39-218ENST00000449489 FCARP24071 287 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 PI4KAP42356 2102 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 SRSF5Q13243 272 aaKnown RBP8.16□□□□□ -1.1
RBM39-218ENST00000449489 RAB33AQ14088 237 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 DGKKQ5KSL6 1271 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 AXDND1Q5T1B0 1012 aaPredicted RBP8.16□□□□□ -1.1
RBM39-218ENST00000449489 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 TICRRQ7Z2Z1 1910 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 GSTCDQ8NEC7 633 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 DEPDC1BQ8WUY9 529 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 GAB3Q8WWW8 586 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 LENG9Q96B70 501 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 B3GALT6Q96L58 329 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 GAD1Q99259 594 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 TTPALQ9BTX7 342 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 IL25Q9H293 177 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 TRPV4Q9HBA0 871 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 ZFP14Q9HCL3 533 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 MIOSQ9NXC5 875 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 ANKFY1Q9P2R3 1169 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
RBM39-218ENST00000449489 NEUROG3Q9Y4Z2 214 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 IPPQ9Y573 584 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 PIAS3Q9Y6X2 628 aa8.16□□□□□ -1.1
RBM39-218ENST00000449489 NUP205Q92621 2012 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 VWA8A3KMH1 1905 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 ESYT2A0FGR8 921 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 ARHGEF37A1IGU5 675 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 FAM221BA6H8Z2 402 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 F8W810 466 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 ARNTLO00327 626 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 SH2B2O14492 632 aaPredicted RBP8.15□□□□□ -1.1
RBM39-218ENST00000449489 ZNF197O14709 1029 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 AXIN1O15169 862 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 ASAP2O43150 1006 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 TADA2AO75478 443 aa8.15□□□□□ -1.1
RBM39-218ENST00000449489 MCM5P33992 734 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms