RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ENC1O14682 589 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 KHNYNO15037 678 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 NDUFB5O43674 189 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TIMP1P01033 207 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 JMJD7P0C870 316 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CYP11B2P19099 503 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CDC25AP30304 524 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 GJA9P57773 515 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TROAPQ12815 778 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 WDR72Q3MJ13 1102 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SNAP47Q5SQN1 464 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ANKS3Q6ZW76 656 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 KCTD17Q8N5Z5 321 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 LMBR1Q8WVP7 490 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TRMT61BQ9BVS5 477 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZMYND12Q9H0C1 365 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 KCND2Q9NZV8 630 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 STAP1Q9ULZ2 295 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZMYM2Q9UBW7 1377 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 A6NJR5 290 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PLCG1P19174 1290 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM160A1Q05DH4 1040 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 NNTQ13423 1086 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 HSP90AA4PQ58FG1 418 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 INTS8Q75QN2 995 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PLPPR4Q7Z2D5 763 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 DSG4Q86SJ6 1040 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF592Q92610 1267 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 RIOX1Q9H6W3 641 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 AGO4Q9HCK5 861 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PADI3Q9ULW8 664 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SMIM35A0A1B0GVV1 85 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ATP2C2O75185 946 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 UBXN1Q04323 297 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 STAT4Q14765 748 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TCEA2Q15560 299 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CCDC183Q5T5S1 534 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 OVOS1Q6IE37 1185 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 MOXD1Q6UVY6 613 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 BTNL9Q6UXG8 535 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TOGARAM2Q6ZUX3 1019 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 GSTA5Q7RTV2 222 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 LRP10Q7Z4F1 713 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SIX5Q8N196 739 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM133AQ8N9E0 248 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM204AQ9H8W3 233 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHRF1Q9P1Y6 1649 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 MYL1P05976 194 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ITGAVP06756 1048 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 NOS2P35228 1153 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SCNN1AP37088 669 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 NSFP46459 744 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 DEUP1Q05D60 604 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PSMD5Q16401 504 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 HADHQ16836 314 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZBTB41Q5SVQ8 909 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 POF1BQ8WVV4 589 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBC1D32Q96NH3 1257 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 TARS2Q9BW92 718 aaKnown RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 OXCT2Q9BYC2 517 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 MAD2L2Q9UI95 211 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 THAP12O43422 761 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 DNTTP04053 509 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ADORA2BP29275 332 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 GCKP35557 465 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CYLC1P35663 651 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 STAT1P42224 750 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PGLYRP2Q96PD5 576 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SIT1Q9Y3P8 196 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 H0Y858 1186 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 RASSF9O75901 435 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 COL3A1P02461 1466 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CA4P22748 312 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SH3BGRP55822 239 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PHLDB2Q86SQ0 1253 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 SFR1Q86XK3 245 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 GPD1LQ8N335 351 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ARHGAP18Q8N392 663 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF333Q96JL9 665 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PASKQ96RG2 1323 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CGRRF1Q99675 332 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CNTNAP2Q9UHC6 1331 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 CTNND2Q9UQB3 1225 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 PCDHB5Q9Y5E4 795 aa6□□□□□ -1.45
CDC42BPA-209ENST00000448940 MAN2B1O00754 1011 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 MSH4O15457 936 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 SPOPO43791 374 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 TAL1P17542 331 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 NAMPTP43490 491 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 PPP1R2P3Q6NXS1 205 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 CCDC42Q96M95 316 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 AIFM3Q96NN9 605 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 RUFY1Q96T51 708 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 OLA1Q9NTK5 396 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 ZNF214Q9UL59 606 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 BRPF3Q9ULD4 1205 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 CACNA1SQ13698 1873 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 UMODL1Q5DID0 1318 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 TREHO43280 583 aa5.99□□□□□ -1.45
CDC42BPA-209ENST00000448940 RB1P06400 928 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms