RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 M0QYV0 167 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 MAPTP10636 758 aaKnown RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 RALAP11233 206 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 SAT1P21673 171 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 STYK1Q6J9G0 422 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 DDX23Q9BUQ8 820 aaKnown RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 APOL6Q9BWW8 343 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 GANQ9H2C0 597 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 KLHL11Q9NVR0 708 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 NUF2Q9BZD4 464 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 LRRC4Q9HBW1 653 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 OSBPP22059 807 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 SSTR3P32745 418 aaPredicted RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 NOP14P78316 857 aaKnown RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 GRIK5Q16478 980 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 RAPH1Q70E73 1250 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 TMC2Q8TDI7 906 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 EPS8L3Q8TE67 593 aaKnown RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 MED15Q96RN5 788 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 FBXO28Q9NVF7 368 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 SRGAP2BP0DMP2 458 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 TPD52P55327 224 aaPredicted RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 PRKCEQ02156 737 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 MTMR2Q13614 643 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 FAM102AQ5T9C2 384 aaPredicted RBP17.59■□□□□ 0.41
TCOF1-206ENST00000445265 TTC16Q8NEE8 873 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 FEZF2Q8TBJ5 459 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 TLK1Q9UKI8 766 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 ZNRF3Q9ULT6 936 aa17.59■□□□□ 0.41
TCOF1-206ENST00000445265 SMAPO00193 183 aa17.58■□□□□ 0.41
TCOF1-206ENST00000445265 EIF3EP60228 445 aaKnown RBP17.58■□□□□ 0.41
TCOF1-206ENST00000445265 EMC2Q15006 297 aa17.58■□□□□ 0.41
TCOF1-206ENST00000445265 TTMPQ5BVD1 217 aa17.58■□□□□ 0.41
TCOF1-206ENST00000445265 SPDYCQ5MJ68 293 aa17.58■□□□□ 0.41
TCOF1-206ENST00000445265 APTXQ7Z2E3 356 aaKnown RBP17.58■□□□□ 0.41
TCOF1-206ENST00000445265 TMEM143Q96AN5 459 aa17.58■□□□□ 0.41
TCOF1-206ENST00000445265 PI4K2AQ9BTU6 479 aa17.58■□□□□ 0.41
TCOF1-206ENST00000445265 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 PSTPIP1O43586 416 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 SLITRK3O94933 977 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 MKRN4PQ13434 485 aaPredicted RBP17.58■□□□□ 0.4
TCOF1-206ENST00000445265 NPY5RQ15761 445 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 EPC2Q52LR7 807 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 OTOP1Q7RTM1 612 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 NUDCD1Q96RS6 583 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 BCL9LQ86UU0 1499 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 CASZ1Q86V15 1759 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 CYP3A7-CYP3A51PA0A087WV96 503 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 CYP3A7P24462 503 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 CDH6P55285 790 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 RPS6P62753 249 aaKnown RBP17.58■□□□□ 0.4
TCOF1-206ENST00000445265 COG2Q14746 738 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 ANKMY2Q8IV38 441 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 ZNF408Q9H9D4 720 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 MAP3K20Q9NYL2 800 aaKnown RBP17.58■□□□□ 0.4
TCOF1-206ENST00000445265 STAT5BP51692 787 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 MCEEQ96PE7 176 aa17.58■□□□□ 0.4
TCOF1-206ENST00000445265 SRRM3A6NNA2 597 aaPredicted RBP17.57■□□□□ 0.4
TCOF1-206ENST00000445265 CCND1P24385 295 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 SCTRP47872 440 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 PPP2R5CQ13362 524 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 KDM4CQ9H3R0 1056 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 GSTA1P08263 222 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 OR6B3Q8NGW1 331 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 BTBD6Q96KE9 485 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 CFAP69A5D8W1 941 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 CASQ2O14958 399 aaPredicted RBP17.57■□□□□ 0.4
TCOF1-206ENST00000445265 GPC4O75487 556 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
TCOF1-206ENST00000445265 ARMCX2Q7L311 632 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 C4orf33Q8N1A6 199 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 SAMD3Q8N6K7 520 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 TRIM4Q9C037 500 aa17.57■□□□□ 0.4
TCOF1-206ENST00000445265 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
TCOF1-206ENST00000445265 APOBEC2Q9Y235 224 aaKnown RBP17.57■□□□□ 0.4
TCOF1-206ENST00000445265 CYP3A4P08684 503 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 RAD23BP54727 409 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 DHX38Q92620 1227 aaKnown RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 MKL1Q969V6 931 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 PRMT6Q96LA8 375 aaPredicted RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 INPP4AQ96PE3 977 aaPredicted RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 GARTP22102 1010 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 DBN1Q16643 649 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 CDKL3Q8IVW4 592 aaPredicted RBP17.56■□□□□ 0.4
TCOF1-206ENST00000445265 KCNV2Q8TDN2 545 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 ERP27Q96DN0 273 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 TAAR1Q96RJ0 339 aa17.56■□□□□ 0.4
TCOF1-206ENST00000445265 SEMA4AQ9H3S1 761 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms