RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 ARHGEF3Q9NR81 526 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 GDE1Q9NZC3 331 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 NUB1Q9Y5A7 615 aa17.84■□□□□ 0.45
CTDSP1-204ENST00000443891 STK25O00506 426 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 CCL16O15467 120 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 PI15O43692 258 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 TBC1D4O60343 1298 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 MICAL2O94851 1124 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 ATF2P15336 505 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 PAX3P23760 479 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 BRCC3P46736 316 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 OSTNP61366 133 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 VARS2Q5ST30 1063 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 RSPO2Q6UXX9 243 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 BRAPQ7Z569 592 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 TCEAL8Q8IYN2 117 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 GPR152Q8TDT2 470 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 SUSD3Q96L08 255 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 ZMAT2Q96NC0 199 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 TBC1D17Q9HA65 648 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 GOLGA2P5Q9HBQ8 144 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 POLIQ9UNA4 740 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 DOCK8Q8NF50 2099 aa17.83■□□□□ 0.44
CTDSP1-204ENST00000443891 SFI1A8K8P3 1242 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 CLTAP09496 248 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 CYP3A5P20815 502 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 NCKAP1LP55160 1127 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 STARD6P59095 220 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 ROR1Q01973 937 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 PRKCQQ04759 706 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 ANGPT1Q15389 498 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 ZRSR1Q15695 479 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 BORCS6Q96GS4 357 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 DNMT3BQ9UBC3 853 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 SIT1Q9Y3P8 196 aa17.82■□□□□ 0.44
CTDSP1-204ENST00000443891 ZNF197O14709 1029 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 LRG1P02750 347 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 PTPN2P17706 415 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 LONP1P36776 959 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 UBA7P41226 1012 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 SLC10A6Q3KNW5 377 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 ZNF280DQ6N043 979 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 PARM1Q6UWI2 310 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 FGF14Q92915 247 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 ANKFY1Q9P2R3 1169 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 CA14Q9ULX7 337 aa17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 MRPS23Q9Y3D9 190 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-204ENST00000443891 PRR23AA6NEV1 266 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 ECI2O75521 394 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 PIGRP01833 764 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 RHOP08100 348 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 IGFBP6P24592 240 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 LRPAP1P30533 357 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 MAGEA9P43362 315 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 NTHL1P78549 312 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 HAUS6Q7Z4H7 955 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 CD302Q8IX05 232 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 LEMD2Q8NC56 503 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 ITFG1Q8TB96 612 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 UBQLN1Q9UMX0 589 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 PCDHB8Q9UN66 801 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 VWA8A3KMH1 1905 aa17.8■□□□□ 0.44
CTDSP1-204ENST00000443891 TTC26A0AVF1 554 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 I3L4J1 428 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 PRRG1O14668 218 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 MCM4P33991 863 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 ZNF131P52739 623 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 GPC5P78333 572 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 RAD51AP2Q09MP3 1159 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 CTXN3Q4LDR2 81 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 ARSHQ5FYA8 562 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 ELMOD1Q8N336 334 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 BICD1Q96G01 975 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 DDX23Q9BUQ8 820 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 PARVGQ9HBI0 331 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 DLGAP2Q9P1A6 1054 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 AFF4Q9UHB7 1163 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 FBXL5Q9UKA1 691 aa17.79■□□□□ 0.44
CTDSP1-204ENST00000443891 M0QZQ0 153 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 OAZ2O95190 189 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 ADRB2P07550 413 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 HARSP12081 509 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 MATR3P43243 847 aaKnown RBP eCLIP17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 LIG4P49917 911 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 POU5F1Q01860 360 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 PPP2R3AQ06190 1150 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 ZBTB6Q15916 424 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 ASCL5Q7RTU5 278 aa17.78■□□□□ 0.44
CTDSP1-204ENST00000443891 PJA1Q8NG27 643 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms