RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 C10orf82Q8WW14 230 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 EIF2AK1Q9BQI3 630 aaKnown RBP21.56■■□□□ 1.04
SHOX2-203ENST00000441443 IRAK4Q9NWZ3 460 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 R3HDM2Q9Y2K5 976 aaKnown RBP21.56■■□□□ 1.04
SHOX2-203ENST00000441443 EMSYQ7Z589 1322 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 KLRG2A4D1S0 409 aaPredicted RBP21.56■■□□□ 1.04
SHOX2-203ENST00000441443 RCN1Q15293 331 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 CMPK2Q5EBM0 449 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 SLFN13Q68D06 897 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 MTDHQ86UE4 582 aaKnown RBP21.56■■□□□ 1.04
SHOX2-203ENST00000441443 NRG4Q8WWG1 115 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 PSPC1Q8WXF1 523 aaKnown RBP21.56■■□□□ 1.04
SHOX2-203ENST00000441443 MAML1Q92585 1016 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 SLC5A5Q92911 643 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 CCDC77Q9BR77 488 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 MKNK1Q9BUB5 465 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 TRAIPQ9BWF2 469 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 HEMGNQ9BXL5 484 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 PCIF1Q9H4Z3 704 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 TDRD3Q9H7E2 651 aaKnown RBP21.56■■□□□ 1.04
SHOX2-203ENST00000441443 UBN1Q9NPG3 1134 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 ZFP69BQ9UJL9 534 aa21.56■■□□□ 1.04
SHOX2-203ENST00000441443 IGKV6D-41A0A0C4DH26 115 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 FSCN2O14926 492 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 EDF1O60869 148 aaKnown RBP21.55■■□□□ 1.04
SHOX2-203ENST00000441443 LGR5O75473 907 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 ZC3H18Q86VM9 953 aaKnown RBP21.55■■□□□ 1.04
SHOX2-203ENST00000441443 DTX3LQ8TDB6 740 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 KIFAP3Q92845 792 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 LENG9Q96B70 501 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 STOML1Q9UBI4 398 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 ATP9AO75110 1047 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 RPA3P35244 121 aaPredicted RBP21.55■■□□□ 1.04
SHOX2-203ENST00000441443 GCLMP48507 274 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 PTK6Q13882 451 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 SPARCL1Q14515 664 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 MTHFD1LQ6UB35 978 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 SLC47A2Q86VL8 602 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 CCDC125Q86Z20 511 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 TPH2Q8IWU9 490 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 SCG3Q8WXD2 468 aaKnown RBP21.55■■□□□ 1.04
SHOX2-203ENST00000441443 NPHS2Q9NP85 383 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 SCOCQ9UIL1 159 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.55■■□□□ 1.04
SHOX2-203ENST00000441443 MEIS2O14770 477 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 CYP26A1O43174 497 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 KRT36O76013 467 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 PTPN4P29074 926 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 VHLP40337 213 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 CDR2Q01850 454 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 IRGCQ6NXR0 463 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 C4orf50Q6ZRC1 276 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 PHLDB2Q86SQ0 1253 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 SLCO2A1Q92959 643 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 MASTLQ96GX5 879 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 DCTN4Q9UJW0 460 aa21.55■■□□□ 1.04
SHOX2-203ENST00000441443 EXOC1LA0A1B0GW35 172 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 SMAPO00193 183 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 EIF3DO15371 548 aaKnown RBP eCLIP21.54■■□□□ 1.04
SHOX2-203ENST00000441443 MAGEB2O15479 319 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 CHMP2AO43633 222 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 GAS8O95995 478 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 FGFR1P11362 822 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 KRT15P19012 456 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 PKN2Q16513 984 aaKnown RBP21.54■■□□□ 1.04
SHOX2-203ENST00000441443 AOC3Q16853 763 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 GPATCH4Q5T3I0 446 aaKnown RBP21.54■■□□□ 1.04
SHOX2-203ENST00000441443 DAB2IPQ5VWQ8 1189 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 TRABD2AQ86V40 505 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 EPS8L1Q8TE68 723 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 FBXO41Q8TF61 875 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 MBOAT7Q96N66 472 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 EURLQ9NYK6 297 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 SIGLEC16A6NMB1 481 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 TISP43B9A030 160 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 MSH4O15457 936 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 SLC26A4O43511 780 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 LAMB3Q13751 1172 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 STAT4Q14765 748 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 SLC1A5Q15758 541 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 NLRP9Q7RTR0 991 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 FAM178BQ8IXR5 827 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 MORC4Q8TE76 937 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 CADM1Q9BY67 442 aaKnown RBP21.54■■□□□ 1.04
SHOX2-203ENST00000441443 TRABDQ9H4I3 376 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 PARVGQ9HBI0 331 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 ACTL7BQ9Y614 415 aa21.54■■□□□ 1.04
SHOX2-203ENST00000441443 GAP43P17677 238 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 CA4P22748 312 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 PPP3CAQ08209 521 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 SYCP3Q8IZU3 236 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 DENND1AQ8TEH3 1009 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 SPIRE2Q8WWL2 714 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 ECE2O60344 883 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 TCEAL1Q15170 157 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 SLC5A9Q2M3M2 681 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 HHIPL2Q6UWX4 724 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 OTOAQ7RTW8 1153 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 ZNF720Q7Z2F6 126 aa21.53■■□□□ 1.04
SHOX2-203ENST00000441443 CCNJLQ8IV13 435 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms