RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 RESTQ13127 1097 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 MCM6Q14566 821 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 SEZ6Q53EL9 994 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 GRASPQ7Z6J2 395 aaPredicted RBP17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 MYCT1Q8N699 235 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 HAPLN2Q9GZV7 340 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 MFSD1Q9H3U5 465 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 TBX20Q9UMR3 447 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 NUB1Q9Y5A7 615 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 CLIC4Q9Y696 253 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 MYO10Q9HD67 2058 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 CITO14578 2027 aa17.76■□□□□ 0.43
SNRPD3-204ENST00000439775 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 TTC26A0AVF1 554 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 ANHXE9PGG2 379 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 TRAK2O60296 914 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 FAM189A1O60320 539 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 TBCAO75347 108 aaKnown RBP17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 LIG4P49917 911 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 CLCN5P51795 746 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 DHX8Q14562 1220 aaKnown RBP17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 VARS2Q5ST30 1063 aaKnown RBP17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 ASTLQ6HA08 431 aaPredicted RBP17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 TMEM105Q8N8V8 129 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 SUSD3Q96L08 255 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 FIZ1Q96SL8 496 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 IRF2BPLQ9H1B7 796 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 TUBGCP4Q9UGJ1 667 aa17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 MORC2Q9Y6X9 1032 aaPredicted RBP17.75■□□□□ 0.43
SNRPD3-204ENST00000439775 H7C4K7 107 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 CCL16O15467 120 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 TBC1D4O60343 1298 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 KRT18P05783 430 aaKnown RBP17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 LRPAP1P30533 357 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 DDIT3P35638 169 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 MRE11P49959 708 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 GTF2BQ00403 316 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 ROR1Q01973 937 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 HTR4Q13639 388 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 MRPL58Q14197 206 aaKnown RBP17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 ALYREFQ86V81 257 aaKnown RBP17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 MAP4K3Q8IVH8 894 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 SLC44A3Q8N4M1 653 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 ZNF461Q8TAF7 563 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 TSPAN18Q96SJ8 248 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 FBXL21Q9UKT6 434 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 CDH7Q9ULB5 785 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 SRPRBQ9Y5M8 271 aaKnown RBP17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 DOCK8Q8NF50 2099 aa17.74■□□□□ 0.43
SNRPD3-204ENST00000439775 PDCD11Q14690 1871 aaKnown RBP17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 OGTO15294 1046 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 NARSO43776 548 aaKnown RBP17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 ABLIM3O94929 683 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 ADRB2P07550 413 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 SRFP11831 508 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 CYP3A5P20815 502 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 MCM4P33991 863 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 PPP2R3AQ06190 1150 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 ZBTB6Q15916 424 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 CWF19L1Q69YN2 538 aaKnown RBP17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 EPSTI1Q96J88 318 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 ST6GALNAC4Q9H4F1 302 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 WNT16Q9UBV4 365 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 CCDC39Q9UFE4 941 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 KCNH3Q9ULD8 1083 aa17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 UBQLN1Q9UMX0 589 aaKnown RBP17.73■□□□□ 0.43
SNRPD3-204ENST00000439775 A0A0B4J269 797 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 ARHGEF37A1IGU5 675 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 WDR27A2RRH5 827 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 K7ELQ4 463 aaPredicted RBP17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 TXLNAP40222 546 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 TNFSF9P41273 254 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 NTHL1P78549 312 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 ENOX2Q16206 610 aaKnown RBP17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 ZNF280DQ6N043 979 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 SLC39A4Q6P5W5 647 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 USP49Q70CQ1 688 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 SIX5Q8N196 739 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 KRI1Q8N9T8 703 aaKnown RBP17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 FGF13Q92913 245 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 KIF12Q96FN5 646 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 ZHX3Q9H4I2 956 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 PCDHB8Q9UN66 801 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 POLIQ9UNA4 740 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 NUMBLQ9Y6R0 609 aa17.72■□□□□ 0.43
SNRPD3-204ENST00000439775 M0QZQ0 153 aa17.71■□□□□ 0.43
SNRPD3-204ENST00000439775 XPOTO43592 962 aaKnown RBP17.71■□□□□ 0.43
SNRPD3-204ENST00000439775 ATF2P15336 505 aa17.71■□□□□ 0.43
SNRPD3-204ENST00000439775 NPR3P17342 541 aa17.71■□□□□ 0.43
SNRPD3-204ENST00000439775 AOC1P19801 751 aa17.71■□□□□ 0.43
SNRPD3-204ENST00000439775 AARSP49588 968 aaKnown RBP eCLIP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms