RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 CACNG4Q9UBN1 327 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 BACE2Q9Y5Z0 518 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 ACACBO00763 2458 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 RALGAPA1Q6GYQ0 2036 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 RFPL2O75678 378 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 MAPTP10636 758 aaKnown RBP12.55□□□□□ -0.4
IRF1-204ENST00000439555 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
IRF1-204ENST00000439555 ABCD1P33897 745 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 CLCNKBP51801 687 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 ATXN1P54253 815 aaKnown RBP12.55□□□□□ -0.4
IRF1-204ENST00000439555 MCL1Q07820 350 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 ZRSR1Q15695 479 aaKnown RBP12.55□□□□□ -0.4
IRF1-204ENST00000439555 ARSHQ5FYA8 562 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
IRF1-204ENST00000439555 ANKS3Q6ZW76 656 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 CEP57Q86XR8 500 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 FEZF2Q8TBJ5 459 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 PLEKHA5Q9HAU0 1116 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 PIDD1Q9HB75 910 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 MTRRQ9UBK8 725 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 FBXW11Q9UKB1 542 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 ZFP37Q9Y6Q3 630 aaPredicted RBP12.55□□□□□ -0.4
IRF1-204ENST00000439555 CLUHO75153 1309 aa12.55□□□□□ -0.4
IRF1-204ENST00000439555 ZFHX4Q86UP3 3567 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 SPTLC1O15269 473 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 CLDN3O15551 220 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 NARSO43776 548 aaKnown RBP12.54□□□□□ -0.4
IRF1-204ENST00000439555 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
IRF1-204ENST00000439555 CFHP08603 1231 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 SPATA31D3P0C874 917 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 RPL17P18621 184 aaKnown RBP12.54□□□□□ -0.4
IRF1-204ENST00000439555 RFX1P22670 979 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 ZNF131P52739 623 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 NCKAP1LP55160 1127 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 KYAT1Q16773 422 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 GLRA4Q5JXX5 417 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 VARS2Q5ST30 1063 aaKnown RBP12.54□□□□□ -0.4
IRF1-204ENST00000439555 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 CD300LGQ6UXG3 332 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 SPATA31D4Q6ZUB0 917 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 CEP120Q8N960 986 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
IRF1-204ENST00000439555 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 CCSER1Q9C0I3 900 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 TBC1D17Q9HA65 648 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
IRF1-204ENST00000439555 TDRD15B5MCY1 1934 aaKnown RBP12.53□□□□□ -0.4
IRF1-204ENST00000439555 SYN3O14994 580 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 N4BP1O75113 896 aaKnown RBP12.53□□□□□ -0.4
IRF1-204ENST00000439555 CLTAP09496 248 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 STARD6P59095 220 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 RAD51AP2Q09MP3 1159 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
IRF1-204ENST00000439555 SF3A1Q15459 793 aaKnown RBP12.53□□□□□ -0.4
IRF1-204ENST00000439555 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 SHDQ96IW2 340 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
IRF1-204ENST00000439555 PLIN2Q99541 437 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 RTKNQ9BST9 563 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 BLOC1S4Q9NUP1 217 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
IRF1-204ENST00000439555 DOCK6Q96HP0 2047 aa12.53□□□□□ -0.4
IRF1-204ENST00000439555 CFAP47Q6ZTR5 3102 aa12.52□□□□□ -0.4
IRF1-204ENST00000439555 PODXLO00592 558 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 ADAM12O43184 909 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 XYLBO75191 536 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 PIGRP01833 764 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 C8AP07357 584 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 LAMP2P13473 410 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 GBP2P32456 591 aaPredicted RBP12.52□□□□□ -0.41
IRF1-204ENST00000439555 OR1D2P34982 312 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 DDIT3P35638 169 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 OSTNP61366 133 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 SOX4Q06945 474 aaPredicted RBP12.52□□□□□ -0.41
IRF1-204ENST00000439555 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 GLYCTKQ8IVS8 523 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
IRF1-204ENST00000439555 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 RAD54LQ92698 747 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
IRF1-204ENST00000439555 ZBTB45Q96K62 511 aaPredicted RBP12.52□□□□□ -0.41
IRF1-204ENST00000439555 MYADMQ96S97 322 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 REEP2Q9BRK0 252 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 OSBPL6Q9BZF3 934 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 PARVGQ9HBI0 331 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 CA14Q9ULX7 337 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
IRF1-204ENST00000439555 TTC26A0AVF1 554 aa12.51□□□□□ -0.41
IRF1-204ENST00000439555 ANHXE9PGG2 379 aa12.51□□□□□ -0.41
IRF1-204ENST00000439555 H7C4K7 107 aa12.51□□□□□ -0.41
IRF1-204ENST00000439555 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms