RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SCP2P22307 547 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 ELF1P32519 619 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 NCKAP1LP55160 1127 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 NTHL1P78549 312 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 MCL1Q07820 350 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 ARSHQ5FYA8 562 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 VARS2Q5ST30 1063 aaKnown RBP20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 CD300LGQ6UXG3 332 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 SLC44A3Q8N4M1 653 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 PHOX2BQ99453 314 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 FAM86C1Q9NVL1 165 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 CDH7Q9ULB5 785 aa20.14■□□□□ 0.81
AC004540.1-201ENST00000439120 SYN3O14994 580 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 CLTAP09496 248 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 PLCG1P19174 1290 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 MCM4P33991 863 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 ARPP19P56211 112 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 KARSQ15046 597 aaKnown RBP20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 KYAT1Q16773 422 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 SLC10A6Q3KNW5 377 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 RTL10Q7L3V2 364 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 PARVGQ9HBI0 331 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 WNT16Q9UBV4 365 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 NUMBLQ9Y6R0 609 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 DOCK8Q8NF50 2099 aa20.13■□□□□ 0.81
AC004540.1-201ENST00000439120 PDCD11Q14690 1871 aaKnown RBP20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 PRRG1O14668 218 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 LRG1P02750 347 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 POU2F2P09086 479 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 CXCL8P10145 99 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 ROR1Q01973 937 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 PPP2R3AQ06190 1150 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 CUL4AQ13619 759 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 HTR4Q13639 388 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 MCM6Q14566 821 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 RSPO2Q6UXX9 243 aaPredicted RBP20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 APPL2Q8NEU8 664 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 RAD54LQ92698 747 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 RTP3Q9BQQ7 232 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 PLEKHA5Q9HAU0 1116 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 CA14Q9ULX7 337 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 TBX20Q9UMR3 447 aa20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.12■□□□□ 0.81
AC004540.1-201ENST00000439120 TRAK2O60296 914 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 AOC1P19801 751 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 ABCD1P33897 745 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 GRIN1Q05586 938 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 CTXN3Q4LDR2 81 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 PABPC1LQ4VXU2 614 aaKnown RBP20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 CWF19L1Q69YN2 538 aaKnown RBP20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 SLC8B1Q6J4K2 584 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 MTSS1LQ765P7 747 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 ZNF461Q8TAF7 563 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 LARP4BQ92615 738 aaKnown RBP20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 FGF13Q92913 245 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 KIF12Q96FN5 646 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 TUBGCP4Q9UGJ1 667 aa20.11■□□□□ 0.81
AC004540.1-201ENST00000439120 ANHXE9PGG2 379 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 XPOTO43592 962 aaKnown RBP20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 NPR3P17342 541 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 MARCKSP29966 332 aaPredicted RBP20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 SPAG1Q07617 926 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 ZNF280DQ6N043 979 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 KRI1Q8N9T8 703 aaKnown RBP20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 ST13P5Q8NFI4 369 aaPredicted RBP20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 GPR152Q8TDT2 470 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 SUSD3Q96L08 255 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 RPF1Q9H9Y2 349 aaKnown RBP20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 BLOC1S4Q9NUP1 217 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 HCFC1R1Q9NWW0 138 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 CCDC39Q9UFE4 941 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 PIEZO1Q92508 2521 aa20.1■□□□□ 0.81
AC004540.1-201ENST00000439120 WDR27A2RRH5 827 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 OGTO15294 1046 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 MEFVO15553 781 aaPredicted RBP20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 TXLNAP40222 546 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 ZNF131P52739 623 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 ITFG1Q8TB96 612 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 MSTO1Q9BUK6 570 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 CCSER1Q9C0I3 900 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 HAPLN2Q9GZV7 340 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 CYP4F11Q9HBI6 524 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 DNMT3BQ9UBC3 853 aaKnown RBP20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 KCNH3Q9ULD8 1083 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 UBQLN1Q9UMX0 589 aaKnown RBP20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 MRPS23Q9Y3D9 190 aaKnown RBP20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 CLIC4Q9Y696 253 aa20.09■□□□□ 0.81
AC004540.1-201ENST00000439120 TTC26A0AVF1 554 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 CPB1P15086 417 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 ATF2P15336 505 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 TNFSF9P41273 254 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 TPGS2Q68CL5 300 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 PARM1Q6UWI2 310 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 LRRC15Q8TF66 581 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 ING5Q8WYH8 240 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 DDX12PQ92771 950 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 FGF14Q92915 247 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 KCNN1Q92952 543 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 FAM212AQ96EL1 285 aa20.08■□□□□ 0.81
AC004540.1-201ENST00000439120 ARHGEF3Q9NR81 526 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms