RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 PADI3Q9ULW8 664 aa13.33□□□□□ -0.27
HLA-DOB-206ENST00000438763 DERAQ9Y315 318 aa13.33□□□□□ -0.27
HLA-DOB-206ENST00000438763 C2CD2Q9Y426 696 aa13.33□□□□□ -0.27
HLA-DOB-206ENST00000438763 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
HLA-DOB-206ENST00000438763 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ZNF500O60304 480 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SERPING1P05155 500 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ZSCAN20P17040 1043 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 PIK3CAP42336 1068 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 MFAP3P55082 362 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TFAMQ00059 246 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 NCOA4Q13772 614 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 LPIN1Q14693 890 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ASIC2Q16515 512 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TWF2Q6IBS0 349 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TRAF7Q6Q0C0 670 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 POTEHQ6S545 545 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ENOSF1Q7L5Y1 443 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 IRF2BP2Q7Z5L9 587 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 HELQQ8TDG4 1101 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TRAIPQ9BWF2 469 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 EPN1Q9Y6I3 576 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SSU72P8A0A1W2PR75 194 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TLR3O15455 904 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 CCP110O43303 1012 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 GHRP10912 638 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 FERP16591 822 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 CD52P31358 61 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 CYLC1P35663 651 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SOX5P35711 763 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 PRKCIP41743 596 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 GCNT1Q02742 428 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 PAK2Q13177 524 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TRPC3Q13507 836 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 BFSP2Q13515 415 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TMEM132DQ14C87 1099 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 XKR4Q5GH76 650 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 HGSNATQ68CP4 663 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 JADE1Q6IE81 842 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ALKAL1Q6UXT8 129 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 FAM43BQ6ZT52 329 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SMG8Q8ND04 991 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 TATDN2Q93075 761 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 SNX27Q96L92 541 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 GPR88Q9GZN0 384 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 NXF3Q9H4D5 531 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 NHEJ1Q9H9Q4 299 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 IPPQ9Y573 584 aa13.32□□□□□ -0.28
HLA-DOB-206ENST00000438763 F8VZ95 297 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 FOXN3O00409 490 aaPredicted RBP13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 ZSCAN12O43309 604 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 ZNF623O75123 536 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 RECQL4O94761 1208 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 NDUFA10O95299 355 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 NFICP08651 508 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 COL6A1P12109 1028 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 SELPP16109 830 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 KLHL30Q0D2K2 578 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 DSC3Q14574 896 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 MTF1Q14872 753 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 ZBTB6Q15916 424 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 C1orf53Q5VUE5 145 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 ANKRD33Q7Z3H0 272 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 MRPL10Q7Z7H8 261 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 HACE1Q8IYU2 909 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 TAF4BQ92750 862 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 CCDC42Q96M95 316 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 PI4K2AQ9BTU6 479 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 OSBPL7Q9BZF2 842 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 IMPG2Q9BZV3 1241 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 C11orf49Q9H6J7 331 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 CNTN3Q9P232 1028 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 HES2Q9Y543 173 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 PCDHB2Q9Y5E7 798 aa13.31□□□□□ -0.28
HLA-DOB-206ENST00000438763 CDH23Q9H251 3354 aa13.3□□□□□ -0.28
HLA-DOB-206ENST00000438763 EIF3CLB5ME19 914 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms