RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 PRIMPOLQ96LW4 560 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 POLD4Q9HCU8 107 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 TUFT1Q9NNX1 390 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ARHGEF3Q9NR81 526 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 SLC2A4RGQ9NR83 387 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 FBXW11Q9UKB1 542 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 SIT1Q9Y3P8 196 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 USP34Q70CQ2 3546 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 C2orf16Q68DN1 1984 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 MYO10Q9HD67 2058 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 N4BP3O15049 544 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 CCL16O15467 120 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 CAPN5O15484 640 aaPredicted RBP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 LRRN2O75325 713 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 RECQL4O94761 1208 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 THP07101 528 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 CYP11B2P19099 503 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ANAPC15P60006 121 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 GPC5P78333 572 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 GUCY1B3Q02153 619 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 TRIM29Q14134 588 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ZNF174Q15697 407 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PSMD5Q16401 504 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PPM1LQ5SGD2 360 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 EEF1DP3Q658K8 133 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 PIK3R5Q8WYR1 880 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 FGF14Q92915 247 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 NACC1Q96RE7 527 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 POLR3CQ9BUI4 534 aaPredicted RBP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 FOXQ1Q9C009 403 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 CCDC113Q9H0I3 377 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 C2orf40Q9H1Z8 148 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 DLGAP2Q9P1A6 1054 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 CDH7Q9ULB5 785 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 GDAQ9Y2T3 454 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ZFP37Q9Y6Q3 630 aaPredicted RBP4.88□□□□□ -1.63
LINC01239-202ENST00000436786 R4GN57 208 aa4.88□□□□□ -1.63
LINC01239-202ENST00000436786 ARHGEF35A5YM69 484 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 ACKR2O00590 384 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 PRKCBP05771 671 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 C8AP07357 584 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 HNRNPA1P09651 372 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01239-202ENST00000436786 SP9P0CG40 484 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 GLULP15104 373 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 FGFR3P22607 806 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 OR1D2P34982 312 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 NEK4P51957 841 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 STARD6P59095 220 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 ST3GAL1Q11201 340 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 SNW1Q13573 536 aaKnown RBP4.87□□□□□ -1.63
LINC01239-202ENST00000436786 RAB33AQ14088 237 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 MAPK6Q16659 721 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 NT5DC1Q5TFE4 455 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 LIN9Q5TKA1 542 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 CD300LGQ6UXG3 332 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 RSPO2Q6UXX9 243 aaPredicted RBP4.87□□□□□ -1.63
LINC01239-202ENST00000436786 TRIM46Q7Z4K8 759 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 DEPTORQ8TB45 409 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 ITFG1Q8TB96 612 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 FGF13Q92913 245 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 KXD1Q9BQD3 176 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 KIFC3Q9BVG8 833 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 HCFC1R1Q9NWW0 138 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 POLIQ9UNA4 740 aa4.87□□□□□ -1.63
LINC01239-202ENST00000436786 MTF2Q9Y483 593 aaPredicted RBP4.87□□□□□ -1.63
LINC01239-202ENST00000436786 I3L4J1 428 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 RPA1P27694 616 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 NAMPTP43490 491 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 ID4P47928 161 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 CLCNKBP51801 687 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 ELAVL2Q12926 359 aaKnown RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 ECM1Q16610 540 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 SLC44A4Q53GD3 710 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 GLRA4Q5JXX5 417 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 AXDND1Q5T1B0 1012 aaPredicted RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 PDXDC1Q6P996 788 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 C1orf210Q8IVY1 113 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 KIAA2013Q8IYS2 634 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 MAML2Q8IZL2 1156 aaPredicted RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 PJA1Q8NG27 643 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 ERMNQ8TAM6 284 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 SLC7A14Q8TBB6 771 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 PPP1R10Q96QC0 940 aaKnown RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 ADPGKQ9BRR6 497 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 SEMA4AQ9H3S1 761 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 DNMT3BQ9UBC3 853 aaKnown RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 COL4A3Q01955 1670 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 SMIM28A0A1B0GU29 152 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 XYLBO75191 536 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 B3GAT3O94766 335 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 OR52Z1P0C646 297 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 TKTP29401 623 aaKnown RBP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 HOXA9P31269 272 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 EFNA5P52803 228 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 PPP2R5AQ15172 486 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 SAFBQ15424 915 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01239-202ENST00000436786 UPP1Q16831 310 aa4.86□□□□□ -1.63
LINC01239-202ENST00000436786 DCAF4L1Q3SXM0 396 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms