RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 UNC5CO95185 931 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 CELF2O95319 508 aaKnown RBP15.72■□□□□ 0.11
DDX56-205ENST00000433257 BPIFB4P59827 614 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 RNASELQ05823 741 aaKnown RBP15.72■□□□□ 0.11
DDX56-205ENST00000433257 RASA2Q15283 850 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 CEP55Q53EZ4 464 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 DLK2Q6UY11 383 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 TDRPQ86YL5 185 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 AGAP11Q8TF27 550 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 PSPC1Q8WXF1 523 aaKnown RBP15.72■□□□□ 0.11
DDX56-205ENST00000433257 STAMBPL1Q96FJ0 436 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 TUBB6Q9BUF5 446 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 LRRC4CQ9HCJ2 640 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 COQ4Q9Y3A0 265 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 USH1CQ9Y6N9 552 aa15.72■□□□□ 0.11
DDX56-205ENST00000433257 SIPA1L1O43166 1804 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 PPP1R12AO14974 1030 aaPredicted RBP15.71■□□□□ 0.11
DDX56-205ENST00000433257 ENTPD3O75355 529 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 LYPLA2O95372 231 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 NDUFB10O96000 172 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 APLP1P51693 650 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 NFIAQ12857 509 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 MKRN4PQ13434 485 aaPredicted RBP15.71■□□□□ 0.11
DDX56-205ENST00000433257 COG2Q14746 738 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 LONRF1Q17RB8 773 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 USH1GQ495M9 461 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 KRT39Q6A163 491 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 ZNF398Q8TD17 642 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 TMC2Q8TDI7 906 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 NT5C1BQ96P26 610 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 ZNF577Q9BSK1 485 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 TMEM39BQ9GZU3 492 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 AGAP1Q9UPQ3 857 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 PTPN22Q9Y2R2 807 aa15.71■□□□□ 0.11
DDX56-205ENST00000433257 FAM47DPA6NHR8 397 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 TMEM88BA6NKF7 163 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 PRPF4O43172 522 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDX56-205ENST00000433257 PSTPIP1O43586 416 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 PLA2G6O60733 806 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 PLS3P13797 630 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 CHRNB2P17787 502 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 MAPK4P31152 587 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 GPC3P51654 580 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 STAT2P52630 851 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 YARSP54577 528 aaKnown RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 CCNG2Q16589 344 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 B3GNT9Q6UX72 402 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 ZNF365Q70YC5 407 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 NOP9Q86U38 636 aaKnown RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 PALB2Q86YC2 1186 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 ARHGEF19Q8IW93 802 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 P2RX7Q99572 595 aaKnown RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 PITPNM3Q9BZ71 974 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 DCLK3Q9C098 648 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 PHACTR1Q9C0D0 580 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 LRMDAQ9H2I8 198 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 ARHGEF10LQ9HCE6 1279 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 TMEM8AQ9HCN3 771 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 CORO1CQ9ULV4 474 aaPredicted RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 ACSL3O95573 720 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 P4HBP07237 508 aaKnown RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 CYP11B1P15538 503 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 MARCKSL1P49006 195 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 POLGP54098 1239 aaPredicted RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 GTF2BQ00403 316 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 FMO1Q01740 532 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 SPARCL1Q14515 664 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 PADI6Q6TGC4 694 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 TRIM72Q6ZMU5 477 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 C2orf69Q8N8R5 385 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 CHURC1Q8WUH1 139 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 SSU72Q9NP77 194 aaKnown RBP15.7■□□□□ 0.1
DDX56-205ENST00000433257 HSPBP1Q9NZL4 362 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
DDX56-205ENST00000433257 ADCY8P40145 1251 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 ITGA8P53708 1063 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 KCNJ2P63252 427 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 PPP3CAQ08209 521 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 TTLL12Q14166 644 aaPredicted RBP15.69■□□□□ 0.1
DDX56-205ENST00000433257 ZRSR2Q15696 482 aaKnown RBP15.69■□□□□ 0.1
DDX56-205ENST00000433257 WASHC2DQ5SRD0 308 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 NBPF12Q5TAG4 269 aaPredicted RBP15.69■□□□□ 0.1
DDX56-205ENST00000433257 LIN9Q5TKA1 542 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 CST9Q5W186 159 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 FAM160B2Q86V87 743 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 ZDHHC14Q8IZN3 488 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 SAMD3Q8N6K7 520 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 PCDHB18PQ96TA0 734 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 LXNQ9BS40 222 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 WDR18Q9BV38 432 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 AAASQ9NRG9 546 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 NINJ2Q9NZG7 142 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 PRR12Q9ULL5 1215 aa15.69■□□□□ 0.1
DDX56-205ENST00000433257 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
DDX56-205ENST00000433257 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
DDX56-205ENST00000433257 ATP2A1O14983 1001 aa15.68■□□□□ 0.1
DDX56-205ENST00000433257 SGPL1O95470 568 aa15.68■□□□□ 0.1
DDX56-205ENST00000433257 RPSAP08865 295 aaKnown RBP15.68■□□□□ 0.1
DDX56-205ENST00000433257 DLATP10515 647 aaKnown RBP15.68■□□□□ 0.1
DDX56-205ENST00000433257 SCP2P22307 547 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms