RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 PRRX2Q99811 253 aa24.81■■□□□ 1.56
HOMER3-203ENST00000433218 C1RP00736 705 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 CXCL8P10145 99 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 FSHRP23945 695 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 YARSP54577 528 aaKnown RBP24.8■■□□□ 1.56
HOMER3-203ENST00000433218 RAB33AQ14088 237 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 ZBTB41Q5SVQ8 909 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 DCLRE1AQ6PJP8 1040 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 PARM1Q6UWI2 310 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 GPR152Q8TDT2 470 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 REEP2Q9BRK0 252 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 BLOC1S4Q9NUP1 217 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 ZNF292O60281 2723 aa24.8■■□□□ 1.56
HOMER3-203ENST00000433218 WDR27A2RRH5 827 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 ANHXE9PGG2 379 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 AOC1P19801 751 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 TNFSF9P41273 254 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 ROR1Q01973 937 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 DHX8Q14562 1220 aaKnown RBP24.79■■□□□ 1.56
HOMER3-203ENST00000433218 SLC10A6Q3KNW5 377 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 SPIRE2Q8WWL2 714 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 ING5Q8WYH8 240 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 UROC1Q96N76 676 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 ACAP3Q96P50 834 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 TCHPQ9BT92 498 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 TOPORSQ9NS56 1045 aaPredicted RBP24.79■■□□□ 1.56
HOMER3-203ENST00000433218 GVINP1Q7Z2Y8 2422 aa24.79■■□□□ 1.56
HOMER3-203ENST00000433218 KCNE1P15382 129 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 KARSQ15046 597 aaKnown RBP24.78■■□□□ 1.56
HOMER3-203ENST00000433218 SLC5A9Q2M3M2 681 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 VARS2Q5ST30 1063 aaKnown RBP24.78■■□□□ 1.56
HOMER3-203ENST00000433218 BRAPQ7Z569 592 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 DNMT3BQ9UBC3 853 aaKnown RBP24.78■■□□□ 1.56
HOMER3-203ENST00000433218 MTMR6Q9Y217 621 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 SRFP11831 508 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 CLCN5P51795 746 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 GUCY2FP51841 1108 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 NCKAP1LP55160 1127 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 ARL6IP4Q66PJ3 421 aaKnown RBP24.78■■□□□ 1.56
HOMER3-203ENST00000433218 GPBP1Q86WP2 473 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 FGF13Q92913 245 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 CDK5RAP3Q96JB5 506 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 NTPCRQ9BSD7 190 aaKnown RBP24.78■■□□□ 1.56
HOMER3-203ENST00000433218 C17orf75Q9HAS0 396 aa24.78■■□□□ 1.56
HOMER3-203ENST00000433218 RBM19Q9Y4C8 960 aaKnown RBP24.78■■□□□ 1.56
HOMER3-203ENST00000433218 DNAH14Q0VDD8 3507 aa24.77■■□□□ 1.56
HOMER3-203ENST00000433218 TOM1L1O75674 476 aa24.77■■□□□ 1.56
HOMER3-203ENST00000433218 HNRNPA1P09651 372 aaKnown RBP eCLIP24.77■■□□□ 1.56
HOMER3-203ENST00000433218 PLCG1P19174 1290 aa24.77■■□□□ 1.56
HOMER3-203ENST00000433218 HOXA9P31269 272 aa24.77■■□□□ 1.56
HOMER3-203ENST00000433218 MCM6Q14566 821 aa24.77■■□□□ 1.56
HOMER3-203ENST00000433218 APBB1IPQ7Z5R6 666 aaPredicted RBP24.77■■□□□ 1.56
HOMER3-203ENST00000433218 TIPINQ9BVW5 301 aa24.77■■□□□ 1.56
HOMER3-203ENST00000433218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.77■■□□□ 1.56
HOMER3-203ENST00000433218 PTPRZ1P23471 2315 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-203ENST00000433218 FAM189A1O60320 539 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 TBC1D4O60343 1298 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 MCL1Q07820 350 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 STRN3Q13033 797 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 SLC39A4Q6P5W5 647 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 USP49Q70CQ1 688 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 NPAS3Q8IXF0 933 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 KXD1Q9BQD3 176 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 IKZF4Q9H2S9 585 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 TBC1D17Q9HA65 648 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 CDH7Q9ULB5 785 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 BACE2Q9Y5Z0 518 aa24.76■■□□□ 1.55
HOMER3-203ENST00000433218 KIF26AQ9ULI4 1882 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-203ENST00000433218 OBSL1O75147 1896 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 GFRA3O60609 400 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 SEC24AO95486 1093 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 ARPP19P56211 112 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 SF3A1Q15459 793 aaKnown RBP24.75■■□□□ 1.55
HOMER3-203ENST00000433218 SPECC1Q5M775 1068 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 PDXDC1Q6P996 788 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 ANKS3Q6ZW76 656 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 ASCL5Q7RTU5 278 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 CCDC105Q8IYK2 499 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 FIZ1Q96SL8 496 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 SLC38A7Q9NVC3 462 aa24.75■■□□□ 1.55
HOMER3-203ENST00000433218 TISP43B9A030 160 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 K7ENM7 598 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 PPEF2O14830 753 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 LRRN2O75325 713 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 CEBPBP17676 345 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 RESTQ13127 1097 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 PABPC1LQ4VXU2 614 aaKnown RBP24.74■■□□□ 1.55
HOMER3-203ENST00000433218 FOXD4L5Q5VV16 416 aaPredicted RBP24.74■■□□□ 1.55
HOMER3-203ENST00000433218 SLC8B1Q6J4K2 584 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 FAM173BQ6P4H8 233 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 HAUS6Q7Z4H7 955 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 FOXD4L4Q8WXT5 416 aaPredicted RBP24.74■■□□□ 1.55
HOMER3-203ENST00000433218 FOXQ1Q9C009 403 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 ZSCAN16Q9H4T2 348 aaPredicted RBP24.74■■□□□ 1.55
HOMER3-203ENST00000433218 DENND4CQ5VZ89 1909 aa24.74■■□□□ 1.55
HOMER3-203ENST00000433218 NUP210Q8TEM1 1887 aaPredicted RBP24.73■■□□□ 1.55
HOMER3-203ENST00000433218 MCM4P33991 863 aa24.73■■□□□ 1.55
HOMER3-203ENST00000433218 ZPBP2Q6X784 338 aa24.73■■□□□ 1.55
HOMER3-203ENST00000433218 FRMD5Q7Z6J6 570 aa24.73■■□□□ 1.55
HOMER3-203ENST00000433218 BICD1Q96G01 975 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms