RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 EVA1CP58658 441 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 KRT85P78386 507 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 ATP8B2P98198 1209 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 CDC42EP1Q00587 391 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 KIF23Q02241 960 aaPredicted RBP4.49□□□□□ -1.69
CLK1-204ENST00000432425 OCA2Q04671 838 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCBP2Q15366 365 aaKnown RBP eCLIP4.49□□□□□ -1.69
CLK1-204ENST00000432425 PPP4R3AQ6IN85 833 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 NLGN4YQ8NFZ3 816 aaPredicted RBP4.49□□□□□ -1.69
CLK1-204ENST00000432425 CAVIN3Q969G5 261 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 RAB24Q969Q5 203 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 ALOXE3Q9BYJ1 711 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 MTO1Q9Y2Z2 717 aaKnown RBP4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHGA9Q9Y5G4 932 aaKnown RBP4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHGA8Q9Y5G5 932 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHGA7Q9Y5G6 932 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHGA6Q9Y5G7 932 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHGA3Q9Y5H0 932 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PCDHA13Q9Y5I0 950 aa4.49□□□□□ -1.69
CLK1-204ENST00000432425 PIPSLA2A3N6 862 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 CDHR4A6H8M9 788 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 ERN1O75460 977 aaKnown RBP4.48□□□□□ -1.69
CLK1-204ENST00000432425 HKR1P10072 659 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 FGFR4P22455 802 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 CCND1P24385 295 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 HSD11B2P80365 405 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 PTPN21Q16825 1174 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 ABHD17BQ5VST6 288 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 EFCAB2Q5VUJ9 269 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 TBC1D15Q8TC07 691 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 SMAD5Q99717 465 aaKnown RBP4.48□□□□□ -1.69
CLK1-204ENST00000432425 TOR3AQ9H497 397 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 GSTO2Q9H4Y5 243 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 PCDH12Q9NPG4 1184 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 TESQ9UGI8 421 aaKnown RBP4.48□□□□□ -1.69
CLK1-204ENST00000432425 AATKQ6ZMQ8 1374 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 SGTAO43765 313 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 HAUS5O94927 633 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 PRSS23O95084 383 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 RPLP2P05387 115 aaKnown RBP4.48□□□□□ -1.69
CLK1-204ENST00000432425 ELANEP08246 267 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 ITGAMP11215 1152 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 PROZP22891 400 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 CXADRP78310 365 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 TARDBPQ13148 414 aaKnown RBP eCLIP4.48□□□□□ -1.69
CLK1-204ENST00000432425 UAP1L1Q3KQV9 507 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 DACT2Q5SW24 774 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 GADL1Q6ZQY3 521 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 FAM43AQ8N2R8 423 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 NUP133Q8WUM0 1156 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 ASB10Q8WXI3 467 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 COQ10AQ96MF6 247 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 PNKPQ96T60 521 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 GALNT9Q9HCQ5 603 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 USP25Q9UHP3 1055 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 KCNE5Q9UJ90 142 aa4.48□□□□□ -1.69
CLK1-204ENST00000432425 CCDC154A6NI56 674 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 OVOL3O00110 214 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 FZD9O00144 591 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 HTRA2O43464 458 aaPredicted RBP4.47□□□□□ -1.69
CLK1-204ENST00000432425 PPFIA2O75334 1257 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 MTHFD1P11586 935 aaKnown RBP4.47□□□□□ -1.69
CLK1-204ENST00000432425 BMP5P22003 454 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 IL10RAQ13651 578 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 RAB39AQ14964 217 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
CLK1-204ENST00000432425 B3GNTL1Q67FW5 361 aaPredicted RBP4.47□□□□□ -1.69
CLK1-204ENST00000432425 DCBLD1Q8N8Z6 715 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 COA7Q96BR5 231 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 MARS2Q96GW9 593 aaKnown RBP4.47□□□□□ -1.69
CLK1-204ENST00000432425 BOD1Q96IK1 185 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 PACSIN1Q9BY11 444 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 SLC13A1Q9BZW2 595 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.47□□□□□ -1.69
CLK1-204ENST00000432425 LIMCH1Q9UPQ0 1083 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 IPPQ9Y573 584 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 WASHC2CQ9Y4E1 1318 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 KAT6AQ92794 2004 aa4.47□□□□□ -1.69
CLK1-204ENST00000432425 GRM6O15303 877 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 LMNAP02545 664 aaKnown RBP4.46□□□□□ -1.7
CLK1-204ENST00000432425 EGR2P11161 476 aaPredicted RBP4.46□□□□□ -1.7
CLK1-204ENST00000432425 IBSPP21815 317 aaPredicted RBP4.46□□□□□ -1.7
CLK1-204ENST00000432425 FDXRP22570 491 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 TGM1P22735 817 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 NOMO3P69849 1222 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 COL10A1Q03692 680 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 C3orf36Q3SXR2 165 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 NOMO2Q5JPE7 1267 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 DNAJC10Q8IXB1 793 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 GPR150Q8NGU9 434 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 IFI44Q8TCB0 444 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 CLPTM1LQ96KA5 538 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 MED15Q96RN5 788 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 HOMER2Q9NSB8 354 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 TBCCD1Q9NVR7 557 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 SYBUQ9NX95 663 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 SPEF1Q9Y4P9 236 aa4.46□□□□□ -1.7
CLK1-204ENST00000432425 CFAP20Q9Y6A4 193 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms