RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 NR2E1Q9Y466 385 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 TOM1L1O75674 476 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 B3GAT3O94766 335 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 PDGFBP01127 241 aaPredicted RBP18.49■□□□□ 0.55
UBE3D-204ENST00000430071 TKTP29401 623 aaKnown RBP18.49■□□□□ 0.55
UBE3D-204ENST00000430071 NMT1P30419 496 aaKnown RBP18.49■□□□□ 0.55
UBE3D-204ENST00000430071 TNFSF9P41273 254 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 SMTNP53814 917 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 STRN3Q13033 797 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
UBE3D-204ENST00000430071 GRAMD1CQ8IYS0 662 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 MYCT1Q8N699 235 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 KREMEN2Q8NCW0 462 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 ASIC4Q96FT7 647 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 MAGEF1Q9HAY2 307 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 ODF2LQ9ULJ1 636 aa18.49■□□□□ 0.55
UBE3D-204ENST00000430071 ZNF202O95125 648 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 KRT18P05783 430 aaKnown RBP18.48■□□□□ 0.55
UBE3D-204ENST00000430071 FGFR3P22607 806 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 CASP1P29466 404 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 ZNF131P52739 623 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 YARSP54577 528 aaKnown RBP18.48■□□□□ 0.55
UBE3D-204ENST00000430071 MCL1Q07820 350 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 NOLC1Q14978 699 aaKnown RBP eCLIP18.48■□□□□ 0.55
UBE3D-204ENST00000430071 SLC39A4Q6P5W5 647 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 DCLRE1AQ6PJP8 1040 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 GPR65Q8IYL9 337 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 CEP57L1Q8IYX8 460 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 CMASQ8NFW8 434 aaPredicted RBP18.48■□□□□ 0.55
UBE3D-204ENST00000430071 TRIM9Q9C026 710 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 ZHX3Q9H4I2 956 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.48■□□□□ 0.55
UBE3D-204ENST00000430071 CNTN3Q9P232 1028 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 USP25Q9UHP3 1055 aa18.48■□□□□ 0.55
UBE3D-204ENST00000430071 CACNA1HO95180 2353 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 TISP43B9A030 160 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 TMEM189-UBE2V1I3L0A0 370 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 FAM13AO94988 1023 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 CXCL8P10145 99 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 KCNE1P15382 129 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 AFMP43652 599 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 UBE2HP62256 183 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 FAM160A1Q05DH4 1040 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 ZC2HC1CQ53FD0 456 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 KRBA2Q6ZNG9 492 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 C15orf39Q6ZRI6 1047 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 CCDC149Q6ZUS6 474 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 ZDHHC14Q8IZN3 488 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 TDRD5Q8NAT2 981 aaKnown RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 ST13P5Q8NFI4 369 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 SMG7Q92540 1137 aaKnown RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 DDX27Q96GQ7 796 aaKnown RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 PAGE5Q96GU1 130 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 MYADMQ96S97 322 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 LMBRD1Q9NUN5 540 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 LARSQ9P2J5 1176 aaKnown RBP18.47■□□□□ 0.55
UBE3D-204ENST00000430071 TUBGCP4Q9UGJ1 667 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 TBX20Q9UMR3 447 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 HCN4Q9Y3Q4 1203 aa18.47■□□□□ 0.55
UBE3D-204ENST00000430071 K7ENM7 598 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 PODXLO00592 558 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 OR1D2P34982 312 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 GUCY2FP51841 1108 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 SIGLEC14Q08ET2 396 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 ZPBP2Q6X784 338 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-204ENST00000430071 APBB1IPQ7Z5R6 666 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-204ENST00000430071 PBXIP1Q96AQ6 731 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 BICD1Q96G01 975 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 C7orf25Q9BPX7 421 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 BLZF1Q9H2G9 400 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 PARVGQ9HBI0 331 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 TOPORSQ9NS56 1045 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-204ENST00000430071 FBXW11Q9UKB1 542 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 TSC2P49815 1807 aa18.46■□□□□ 0.55
UBE3D-204ENST00000430071 ANKRD63C9JTQ0 380 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 CLDN3O15551 220 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 TRAK2O60296 914 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 FAM189A1O60320 539 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 TBCAO75347 108 aaKnown RBP18.45■□□□□ 0.54
UBE3D-204ENST00000430071 MATR3P43243 847 aaKnown RBP eCLIP18.45■□□□□ 0.542e-7■■■■■ 26.8
UBE3D-204ENST00000430071 NTHL1P78549 312 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 AMPD3Q01432 767 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 CUL4BQ13620 913 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 IER5LQ5T953 404 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 CNNM4Q6P4Q7 775 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 RSAD2Q8WXG1 361 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 LRRC27Q9C0I9 530 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 PLEKHA4Q9H4M7 779 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 WDR6Q9NNW5 1121 aaKnown RBP18.45■□□□□ 0.54
UBE3D-204ENST00000430071 USTQ9Y2C2 406 aa18.45■□□□□ 0.54
UBE3D-204ENST00000430071 TTC26A0AVF1 554 aa18.44■□□□□ 0.54
UBE3D-204ENST00000430071 FRMD3A2A2Y4 597 aa18.44■□□□□ 0.54
UBE3D-204ENST00000430071 LACTBL1A8MY62 500 aa18.44■□□□□ 0.54
UBE3D-204ENST00000430071 CLUHO75153 1309 aa18.44■□□□□ 0.54
UBE3D-204ENST00000430071 ZMYND10O75800 440 aa18.44■□□□□ 0.54
UBE3D-204ENST00000430071 PAPLNO95428 1278 aa18.44■□□□□ 0.54
UBE3D-204ENST00000430071 PRR29P0C7W0 189 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms