RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CCDC195A0A1B0GUA6 201 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 TEX33O43247 280 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 KRT8P05787 483 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 RALBP11234 206 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 PDGFRAP16234 1089 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 NFIXQ14938 502 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 NBPF20Q3BBV1 942 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
LDB3-205ENST00000429277 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 NCK2O43639 380 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 HMGCS2P54868 508 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
LDB3-205ENST00000429277 SNAPC2Q13487 334 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 NCOA4Q13772 614 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 PDK1Q15118 436 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 SYTL3Q4VX76 610 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 SRBD1Q8N5C6 995 aaKnown RBP13.45□□□□□ -0.26
LDB3-205ENST00000429277 CHST13Q8NET6 341 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 C1orf54Q8WWF1 131 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 ECT2Q9H8V3 914 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 PSD3Q9NYI0 1048 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
LDB3-205ENST00000429277 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 KBTBD13C9JR72 458 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 H0Y3Z8 333 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 KCNN4O15554 427 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 PNPLA4P41247 253 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 RGS4P49798 205 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 ARID5BQ14865 1188 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 ZNF280CQ8ND82 737 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 RAET1EQ8TD07 263 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 RANBP17Q9H2T7 1088 aaKnown RBP13.44□□□□□ -0.26
LDB3-205ENST00000429277 RSAD1Q9HA92 442 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 PSMC3IPQ9P2W1 217 aaPredicted RBP13.44□□□□□ -0.26
LDB3-205ENST00000429277 PCDHB2Q9Y5E7 798 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 A0A1W2PQJ5 194 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 MYO1CO00159 1063 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 HNRNPH2P55795 449 aaKnown RBP13.44□□□□□ -0.26
LDB3-205ENST00000429277 CYFIP1Q7L576 1253 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 SPATA21Q7Z572 469 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 TAGAPQ8N103 731 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 ROPN1BQ9BZX4 212 aaPredicted RBP13.44□□□□□ -0.26
LDB3-205ENST00000429277 ROPN1Q9HAT0 212 aaPredicted RBP13.44□□□□□ -0.26
LDB3-205ENST00000429277 VPS9D1Q9Y2B5 631 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 RRN3P2A6NIE6 340 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 PRPF4O43172 522 aaKnown RBP eCLIP13.44□□□□□ -0.26
LDB3-205ENST00000429277 ATP9BO43861 1147 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 TLR2O60603 784 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 CYP2C8P10632 490 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 KCNK16Q96T55 309 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 SLC7A5P2Q9GIP4 190 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 CCDC90BQ9GZT6 254 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 BLOC1S6Q9UL45 172 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 APOA1P02647 267 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 SPRP35270 261 aaPredicted RBP13.44□□□□□ -0.26
LDB3-205ENST00000429277 PCYOX1LQ8NBM8 494 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 ANKEF1Q9NU02 776 aa13.44□□□□□ -0.26
LDB3-205ENST00000429277 TADA2AO75478 443 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 MUTP22033 750 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 NMT1P30419 496 aaKnown RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 CENPCQ03188 943 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 EFHC1Q5JVL4 640 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 TTC30AQ86WT1 665 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 ARHGEF38Q9NXL2 777 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 PKD2L2Q9NZM6 624 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 FLT1P17948 1338 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 H0Y626 953 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 TRIM16O95361 564 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 SNRNP35Q16560 246 aaKnown RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 RBBP8NLQ8NC74 664 aaPredicted RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 SYN2Q92777 582 aaPredicted RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 NT5C1AQ9BXI3 368 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 VCPKMTQ9H867 229 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 C5orf58C9J3I9 102 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 MTMR2Q13614 643 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 CUL3Q13618 768 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 NAB2Q15742 525 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 FAM151AQ8WW52 585 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 TMEM8AQ9HCN3 771 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 AFF4Q9UHB7 1163 aaKnown RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 LRRIQ3A6PVS8 624 aaPredicted RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 HMGB3O15347 200 aaKnown RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 NDUFS3O75489 264 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 KLHL2O95198 593 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 ATP1A1P05023 1023 aaKnown RBP13.43□□□□□ -0.26
LDB3-205ENST00000429277 NR3C2P08235 984 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 EMC2Q15006 297 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 C16orf86Q6ZW13 317 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 CEP70Q8NHQ1 597 aa13.43□□□□□ -0.26
LDB3-205ENST00000429277 FRMD8P1Q9BZ68 369 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms