RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ARSEP51690 589 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 MGAT5Q09328 741 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 DCUN1D2Q6PH85 259 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 EIF1ADQ8N9N8 165 aaKnown RBP13.26□□□□□ -0.29
CDH3-202ENST00000429102 TMEM143Q96AN5 459 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 DNPEPQ9ULA0 475 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDH3-202ENST00000429102 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
CDH3-202ENST00000429102 EPHB2P29323 1055 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 RAD23BP54727 409 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 IRX4P78413 519 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 CDR2Q01850 454 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 PRKG1Q13976 671 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 TTC8Q8TAM2 541 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 MXRA8Q9BRK3 442 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 OSBPL8Q9BZF1 889 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 MYH11P35749 1972 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 RPA3P35244 121 aaPredicted RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 NPTX2P47972 431 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 SIX1Q15475 284 aaPredicted RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 CYP4A22Q5TCH4 519 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 FOXR2Q6PJQ5 311 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 ZBTB33Q86T24 672 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 LONP2Q86WA8 852 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 FBF1Q8TES7 1133 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 CHURC1Q8WUH1 139 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 IFT74Q96LB3 600 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 TRIM6Q9C030 488 aaPredicted RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 GABBR1Q9UBS5 961 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 SLC12A4Q9UP95 1085 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 C15orf41Q9Y2V0 281 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 CFAP69A5D8W1 941 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 LRRIQ4A6NIV6 560 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 SSTR1P30872 391 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 PDIA2Q13087 525 aaKnown RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 ITIH4Q14624 930 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 CCDC6Q16204 474 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 BRDTQ58F21 947 aaPredicted RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 PCNX4Q63HM2 1172 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 ACAD10Q6JQN1 1059 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 C11orf63Q6NUN7 778 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 MOXD1Q6UVY6 613 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 ARHGEF18Q6ZSZ5 1173 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 C15orf52Q6ZUT6 534 aaKnown RBP13.25□□□□□ -0.29
CDH3-202ENST00000429102 FAM71AQ8IYT1 594 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 LRRC8CQ8TDW0 803 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 PARD3BQ8TEW8 1205 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 BSNDQ8WZ55 320 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 TRABDQ9H4I3 376 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 PCSK1NQ9UHG2 260 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
CDH3-202ENST00000429102 PEX10O60683 326 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 KRT1P04264 644 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 WDR4P57081 412 aaKnown RBP13.24□□□□□ -0.29
CDH3-202ENST00000429102 IL9RQ01113 521 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 BBS9Q3SYG4 887 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 LRRC37BQ96QE4 947 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 DCLK3Q9C098 648 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 PHTF1Q9UMS5 762 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 NEU2Q9Y3R4 380 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 ATXN2Q99700 1313 aaKnown RBP13.24□□□□□ -0.29
CDH3-202ENST00000429102 HSPA6P17066 643 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 PPP2R5CQ13362 524 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 ZBTB41Q5SVQ8 909 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 ATL2Q8NHH9 583 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 ZNF570Q96NI8 536 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 RPS6KC1Q96S38 1066 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 SEL1LQ9UBV2 794 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 AGTPBP1Q9UPW5 1226 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 AFF2P51816 1311 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 KITP10721 976 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 GHRP10912 638 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 LIG4P49917 911 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 WNT7BP56706 349 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 WLSQ5T9L3 541 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 KIAA1683Q9H0B3 1180 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 TBX20Q9UMR3 447 aa13.24□□□□□ -0.29
CDH3-202ENST00000429102 UMODL1Q5DID0 1318 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 F8VP50 259 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 PECAM1P16284 738 aaPredicted RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
CDH3-202ENST00000429102 ITIH2P19823 946 aa13.23□□□□□ -0.29
CDH3-202ENST00000429102 DSG3P32926 999 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms