RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 STAMBPL1Q96FJ0 436 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 BICD1Q96G01 975 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 IFT74Q96LB3 600 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 NLRP4Q96MN2 994 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 RNF14Q9UBS8 474 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 SLC12A6Q9UHW9 1150 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 SNX12Q9UMY4 172 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 GINS2Q9Y248 185 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 MBLAC1A4D2B0 266 aaPredicted RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 ARVCFO00192 962 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 GAS2O43903 313 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 B4GALT4O60513 344 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 PQBP1O60828 265 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 ZMYND10O75800 440 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 RHOBTB3O94955 611 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 NPTXRO95502 500 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SRGAP2CP0DJJ0 459 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 PLS3P13797 630 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 GAP43P17677 238 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 EN2P19622 333 aaPredicted RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 GLRA2P23416 452 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 NMT1P30419 496 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 HOXC8P31273 242 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 ARL2P36404 184 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 ZNF131P52739 623 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SEC24CP53992 1094 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 LAMTOR4Q0VGL1 99 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 STK4Q13043 487 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 PAK2Q13177 524 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 BIRC3Q13489 604 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 CAPSQ13938 189 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 FAM26FQ5R3K3 315 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 GKAP1Q5VSY0 366 aaPredicted RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 SPATA21Q7Z572 469 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SPATA4Q8NEY3 305 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 WHAMMQ8TF30 809 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 WNT8BQ93098 351 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 TBC1D31Q96DN5 1066 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 ZNF570Q96NI8 536 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 DNAJC7Q99615 494 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 NDST4Q9H3R1 872 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 C11orf49Q9H6J7 331 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 ZFATQ9P243 1243 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 SLC12A4Q9UP95 1085 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 PCDHA2Q9Y5H9 948 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SLC16A4O15374 487 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 GCNT3O95395 438 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 CTSHP09668 335 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 LINGO3P0C6S8 592 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 TCP1P17987 556 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 CASP5P51878 434 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 LAMB3Q13751 1172 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 CCDC122Q5T0U0 273 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 CCDC181Q5TID7 509 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SESTD1Q86VW0 696 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 KIAA0319LQ8IZA0 1049 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 KIRREL3Q8IZU9 778 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SH2D3CQ8N5H7 860 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 ANKLE1Q8NAG6 615 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 RNF149Q8NC42 400 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 KIAA0895Q8NCT3 520 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 SUDS3Q9H7L9 328 aaPredicted RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 KMT5AQ9NQR1 393 aa12.23□□□□□ -0.45
CECR3-201ENST00000428828 DMGDHQ9UI17 866 aaKnown RBP12.23□□□□□ -0.45
CECR3-201ENST00000428828 ADGRA3Q8IWK6 1321 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 SCN5AQ14524 2016 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 GOLGA6L10A0A0M3HER8 536 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 SMIM35A0A1B0GVV1 85 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 MYBP10242 640 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 NPTX2P47972 431 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 EHHADHQ08426 723 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 BYSLQ13895 437 aaKnown RBP12.22□□□□□ -0.45
CECR3-201ENST00000428828 ITIH4Q14624 930 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 LBRQ14739 615 aaKnown RBP12.22□□□□□ -0.45
CECR3-201ENST00000428828 MEA1Q16626 185 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
CECR3-201ENST00000428828 KIZQ2M2Z5 673 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 SGSM1Q2NKQ1 1148 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 ZC2HC1CQ53FD0 456 aaPredicted RBP12.22□□□□□ -0.45
CECR3-201ENST00000428828 THEMIS2Q5TEJ8 643 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
CECR3-201ENST00000428828 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 CACNA2D4Q7Z3S7 1137 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 DEPTORQ8TB45 409 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 FAM81AQ8TBF8 368 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 CPLX3Q8WVH0 158 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 CENPTQ96BT3 561 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 TSC22D3Q99576 134 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 TMBIM4Q9HC24 238 aa12.22□□□□□ -0.45
CECR3-201ENST00000428828 A0A1W2PQC6 194 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms