RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FBXL13Q8NEE6 735 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 TAS1R2Q8TE23 839 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF516Q92618 1163 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 TSPAN18Q96SJ8 248 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 LSM14BQ9BX40 385 aaKnown RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 MRPL9Q9BYD2 267 aaKnown RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 IMPG2Q9BZV3 1241 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 FAM207AQ9NSI2 230 aaPredicted RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 DPP3Q9NY33 737 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 ITGA11Q9UKX5 1188 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 UBQLN1Q9UMX0 589 aaKnown RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 PLAGL2Q9UPG8 496 aa8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
HMGA1P4-201ENST00000428643 A0A1W2PQC6 194 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 CASTOR2A6NHX0 329 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TBKBP1A7MCY6 615 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 INPPL1O15357 1258 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 OFD1O75665 1012 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 ITGB3P05106 788 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 KLK7P49862 253 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 RBP5P82980 135 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 LRMPQ12912 555 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TUSC3Q13454 348 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 NR1I3Q14994 352 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF699Q32M78 642 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 PAN2Q504Q3 1202 aaKnown RBP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 EPC2Q52LR7 807 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 WDR44Q5JSH3 913 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM240Q5SV17 173 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TRIM65Q6PJ69 517 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 ALKAL1Q6UXT8 129 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 C15orf39Q6ZRI6 1047 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMCO2Q7Z6W1 182 aaPredicted RBP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 VSTM4Q8IW00 320 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 LRRC43Q8N309 656 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 TMEM130Q8N3G9 435 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 ZNF560Q96MR9 790 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 PPP1R10Q96QC0 940 aaKnown RBP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 ERGIC2Q96RQ1 377 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 YME1L1Q96TA2 773 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 GOLGA2P5Q9HBQ8 144 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 CXXC1Q9P0U4 656 aaPredicted RBP8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 SLC4A7Q9Y6M7 1214 aa8.53□□□□□ -1.04
HMGA1P4-201ENST00000428643 GOLGA6L6A8MZA4 724 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 H0YGN5 161 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZC3H11AO75152 810 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 VNN1O95497 513 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 C4BPAP04003 597 aaKnown RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 TPM1P09493 284 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SLC9A1P19634 815 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 CYP3A5P20815 502 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 PON1P27169 355 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 CDC25BP30305 580 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 PNPLA4P41247 253 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 MCCD1P59942 119 aaPredicted RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 MYL6P60660 151 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 NOP14P78316 857 aaKnown RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 APBA1Q02410 837 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SOX4Q06945 474 aaPredicted RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 MYO1EQ12965 1108 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZBTB6Q15916 424 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 PPFIBP1Q86W92 1011 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SPC24Q8NBT2 197 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 GSTCDQ8NEC7 633 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 NEK11Q8NG66 645 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 RSPH1Q8WYR4 309 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 HERVK_113Q902F9 699 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SEMA4DQ92854 862 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 HPDLQ96IR7 371 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 NT5C1BQ96P26 610 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 FAM193BQ96PV7 902 aaPredicted RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SLC9A7Q96T83 725 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZBED2Q9BTP6 218 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 PI4K2AQ9BTU6 479 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 TBC1D13Q9NVG8 400 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 RAB20Q9NX57 234 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 MIOSQ9NXC5 875 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 KANSL3Q9P2N6 904 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 CACNG4Q9UBN1 327 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SIX4Q9UIU6 781 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 AGAP1Q9UPQ3 857 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 SIK3Q9Y2K2 1263 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 MKI67P46013 3256 aaKnown RBP8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 ALPK3Q96L96 1907 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 LTBP2Q14767 1821 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 ITIH6Q6UXX5 1313 aa8.52□□□□□ -1.05
HMGA1P4-201ENST00000428643 PODXLO00592 558 aa8.51□□□□□ -1.05
HMGA1P4-201ENST00000428643 PPEF2O14830 753 aa8.51□□□□□ -1.05
HMGA1P4-201ENST00000428643 PMM2O15305 246 aa8.51□□□□□ -1.05
HMGA1P4-201ENST00000428643 DGKIO75912 1065 aa8.51□□□□□ -1.05
HMGA1P4-201ENST00000428643 ASS1P00966 412 aaKnown RBP8.51□□□□□ -1.05
HMGA1P4-201ENST00000428643 ATP2A2P16615 1042 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms