RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 TSHZ1Q6ZSZ6 1077 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 CCDC65Q8IXS2 484 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 CCDC110Q8TBZ0 833 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 SNRNP27Q8WVK2 155 aaKnown RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 INIPQ9NRY2 104 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 BMP2KQ9NSY1 1161 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 HEY2Q9UBP5 337 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 TMEM98Q9Y2Y6 226 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 CYP2D7A0A087X1C5 515 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 XRCC5P13010 732 aaKnown RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 CHRNB2P17787 502 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 IVDP26440 423 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 MAN1A1P33908 653 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 CHN2P52757 468 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 TBL3Q12788 808 aaKnown RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 GRM4Q14833 912 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 AAGABQ6PD74 315 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 RNF207Q6ZRF8 634 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 SCFD1Q8WVM8 642 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 RIOK1Q9BRS2 568 aaKnown RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 THAP2Q9H0W7 228 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 SSU72Q9NP77 194 aaKnown RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 ASIC3Q9UHC3 531 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 TRAF3IP3Q9Y228 551 aa17.05■□□□□ 0.32
C9orf3-206ENST00000428313 MTO1Q9Y2Z2 717 aaKnown RBP17.05■□□□□ 0.32
C9orf3-206ENST00000428313 NR2F2P24468 414 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 KCNJ1P48048 391 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 VPS41P49754 854 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 ITGA8P53708 1063 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 CDK16Q00536 496 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 SPIDRQ14159 915 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 RBM44Q6ZP01 1051 aaKnown RBP17.04■□□□□ 0.32
C9orf3-206ENST00000428313 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 TMPRSS6Q8IU80 811 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 SNX29Q8TEQ0 813 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 ARHGEF38Q9NXL2 777 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 ROBO3Q96MS0 1386 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 SMIM18P0DKX4 95 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 ALOX15P16050 662 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-206ENST00000428313 MTTPP55157 894 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 CALCRLQ16602 461 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 KLHDC10Q6PID8 442 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 RIPOR1Q6ZS17 1223 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 KCNK18Q7Z418 384 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 CROCCP3Q8IVE0 287 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 TRIM55Q9BYV6 548 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 C17orf75Q9HAS0 396 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 DMTF1Q9Y222 760 aa17.04■□□□□ 0.32
C9orf3-206ENST00000428313 TCRBV7S2A1N4TA0A589 114 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 TMEM247A6NEH6 219 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-206ENST00000428313 PYGMP11217 842 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 RPA3P35244 121 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-206ENST00000428313 HOXD12P35452 270 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 SLC15A3Q8IY34 581 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 RBM38Q9H0Z9 239 aaKnown RBP17.03■□□□□ 0.32
C9orf3-206ENST00000428313 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 PLK2Q9NYY3 685 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 GCNT4Q9P109 453 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 TNS2Q63HR2 1409 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 KANSL1LA0AUZ9 987 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 TRIM43BA6NCK2 446 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 E9PBE3 544 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 TYROBPO43914 113 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 CA4P22748 312 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 SLC1A5Q15758 541 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 UGT2A3Q6UWM9 527 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 RAPH1Q70E73 1250 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 BBS5Q8N3I7 341 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 BBOF1Q8ND07 529 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 RFWD2Q8NHY2 731 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 CD101Q93033 1021 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 PANX3Q96QZ0 392 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 STK33Q9BYT3 514 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 ANAPC5Q9UJX4 755 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 TELO2Q9Y4R8 837 aa17.03■□□□□ 0.32
C9orf3-206ENST00000428313 CICQ96RK0 1608 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-206ENST00000428313 ARHGAP10A1A4S6 786 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 TM7SF2O76062 418 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 VCLP18206 1134 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 GNA11P29992 359 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 ARFIP2P53365 341 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 PDE1BQ01064 536 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 PDK3Q15120 406 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 ANKRD20A4Q4UJ75 823 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 BORAQ6PGQ7 559 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 ARMCX6Q7L4S7 300 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 GRK7Q8WTQ7 553 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 FAM172AQ8WUF8 416 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms