RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 ENPEPQ07075 957 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 NAB2Q15742 525 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 ZBTB6Q15916 424 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
VARS2-203ENST00000428017 ZNF697Q5TEC3 545 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 TCERG1LQ5VWI1 586 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
VARS2-203ENST00000428017 DCLRE1AQ6PJP8 1040 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 FRMD5Q7Z6J6 570 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
VARS2-203ENST00000428017 MTMR12Q9C0I1 747 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 THAP9Q9H5L6 903 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 LRRIQ3A6PVS8 624 aaPredicted RBP16.37■□□□□ 0.21
VARS2-203ENST00000428017 IKBKBO14920 756 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 PHACTR2O75167 634 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 TADA2AO75478 443 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 FGF18O76093 207 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 B3GAT3O94766 335 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 CLSTN1O94985 981 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 CAVIN2O95810 425 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 KRT19P08727 400 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 ZNF165P49910 485 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 CLCNKBP51801 687 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 BIRC3Q13489 604 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 SLC39A11Q8N1S5 342 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 KLHL23Q8NBE8 558 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 LRCH3Q96II8 777 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 CACNG4Q9UBN1 327 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
VARS2-203ENST00000428017 ITGA11Q9UKX5 1188 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 NUB1Q9Y5A7 615 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
VARS2-203ENST00000428017 BECN2A8MW95 431 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 TRAPPC3O43617 180 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 LRPAP1P30533 357 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 GUCY2FP51841 1108 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 RBP5P82980 135 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 TRPC3Q13507 836 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 UPP1Q16831 310 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 OR5B17Q8NGF7 314 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 IGSF21Q96ID5 467 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 CNOT6LQ96LI5 555 aaKnown RBP16.36■□□□□ 0.21
VARS2-203ENST00000428017 MED15Q96RN5 788 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 PAAF1Q9BRP4 392 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 MMRN2Q9H8L6 949 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
VARS2-203ENST00000428017 SMTNL1A8MU46 457 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 C5orf67F2Z3F1 127 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 KIF4AO95239 1232 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 ITGB3P05106 788 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 TRIM49P0CI25 452 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 TRIM49CP0CI26 452 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 POLR2BP30876 1174 aaKnown RBP16.35■□□□□ 0.21
VARS2-203ENST00000428017 GTF2H1P32780 548 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 PNPLA4P41247 253 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
VARS2-203ENST00000428017 DLG4P78352 724 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 CLDN10P78369 228 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 PLCB3Q01970 1234 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
VARS2-203ENST00000428017 GPM6BQ13491 265 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
VARS2-203ENST00000428017 C9orf57Q5W0N0 161 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 TRAPPC11Q7Z392 1133 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 SPRED2Q7Z698 418 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 ANKRD20A12PQ8NF67 263 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 HASPINQ8TF76 798 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 BORCS6Q96GS4 357 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 ZNF560Q96MR9 790 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 BPIFA3Q9BQP9 254 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 ANP32EQ9BTT0 268 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 TSPY26PQ9H489 355 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 ADAM28Q9UKQ2 775 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 AGAP1Q9UPQ3 857 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
VARS2-203ENST00000428017 PTPRJQ12913 1337 aa16.35■□□□□ 0.21
VARS2-203ENST00000428017 H3BNC9 293 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 TPM2P07951 284 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 PAX3P23760 479 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 GCLMP48507 274 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 TPM4P67936 248 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 UBE3AQ05086 875 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 MYO1EQ12965 1108 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 GPR153Q6NV75 609 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 FAM84AQ96KN4 292 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 ALG13Q9NP73 1137 aaKnown RBP16.34■□□□□ 0.21
VARS2-203ENST00000428017 MARCH5Q9NX47 278 aa16.34■□□□□ 0.21
VARS2-203ENST00000428017 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.21
VARS2-203ENST00000428017 TRIOBPQ9H2D6 2365 aa16.33■□□□□ 0.2
VARS2-203ENST00000428017 KCNJ18B7U540 433 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms